| New model in OGS2.0 | DPOGS201840 |
|---|---|
| Genomic Position | scaffold22:- 75973-84314 |
| See gene structure | |
| CDS Length | 762 |
| Paired RNAseq reads | 217 |
| Single RNAseq reads | 1173 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG6024, isoform E (4e-68) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG6024 CG6024-PD [Tribolium castaneum] (4e-78) |
| Best NR hit (blastx) | PREDICTED: similar to CG6024 CG6024-PD [Tribolium castaneum] (2e-70) |
| GeneOntology terms | ND |
| InterPro families | IPR000859 CUB IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site |
| Orthology group | MCL11930 |
Nucleotide sequence:
ATGGACTCGCTATGCAAGGACCACTTCTTGCAAAGACAGTACCGTAAGCTGGACGGCGGC
GTGCTCTGGTCTCGCAACGAGCGGAACCTGGATTGTACCGTCACCTTCCAGACTCACAGC
ATCCTGCAACGTTTTATGCTGCACTTCGATCTGCTGCAGCTCGACTGCAATGATCATCTA
TACGTCTACGATGGCGCTCATGCCACCGCACCCCCAAAGGCGGACCTGTCCTGTCGCAAC
ACGAAGCAGCAGGTGGGCGCGCTGTTCACACGCAGCAACTTCGTCACGCTCAAGTACGTG
ACCGACAACTGGGGTACTGAGGCCAACGGCTTCAAACTCGTCATCACTGCCGTCAAGGAC
CCCAAACATGGATGTAAGGAGTTCAGATGTAAGCAGCGAGAGTTTTGTGTGAGCGCCGAC
CTCACCTGTGACGGAGTGGATCACTGCGCCGACGGGTCTGACGAAGACACCGCCGCCCTC
TGTCCTGAGAGTGGTGGTGGAGCGGGCGGTGGTCCGTGGGTGGTGGCGGGGGCGGGCGGC
GCGGTGCTGGCGACGATCAGCGTGGCCGCCGCTGTCTGCTGCTACTGCCGACGACGAGCG
CCCGCCAGGAGGACGCACTTACATTTACAACAAATGGCAAGCAGCAACGGGTCGGGCGGC
GGCGGCAAGGGCGCCGCCTCGCCCGCCACGAGGCTGCCGGGAAACTGGGCGCACCCTGCG
GGCCCGCGCGGACCTGTGAGTTCAGGGGAGAGTGCTGTGTGA
Protein sequence:
MDSLCKDHFLQRQYRKLDGGVLWSRNERNLDCTVTFQTHSILQRFMLHFDLLQLDCNDHL
YVYDGAHATAPPKADLSCRNTKQQVGALFTRSNFVTLKYVTDNWGTEANGFKLVITAVKD
PKHGCKEFRCKQREFCVSADLTCDGVDHCADGSDEDTAALCPESGGGAGGGPWVVAGAGG
AVLATISVAAAVCCYCRRRAPARRTHLHLQQMASSNGSGGGGKGAASPATRLPGNWAHPA
GPRGPVSSGESAV