| New model in OGS2.0 | DPOGS201842 |
|---|---|
| Genomic Position | scaffold22:- 51081-58550 |
| See gene structure | |
| CDS Length | 549 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 19 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006094 (2e-23) |
| Best Drosophila hit | ND |
| Best Human hit | laminin subunit alpha-1 precursor (3e-07) |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (6e-18) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-19) |
| GeneOntology terms | GO:0005515 protein binding GO:0007155 cell adhesion GO:0005201 extracellular matrix structural constituent GO:0030334 regulation of cell migration GO:0030155 regulation of cell adhesion GO:0007166 cell surface receptor linked signaling pathway GO:0045995 regulation of embryonic development GO:0002011 morphogenesis of an epithelial sheet GO:0045198 establishment of epithelial cell apical/basal polarity GO:0009888 tissue development GO:0005102 receptor binding GO:0031012 extracellular matrix GO:0043208 glycosphingolipid binding GO:0031175 neuron projection development GO:0060441 epithelial tube branching involved in lung morphogenesis GO:0060445 branching involved in salivary gland morphogenesis GO:0005578 proteinaceous extracellular matrix GO:0005606 laminin-1 complex GO:0005576 extracellular region GO:0005604 basement membrane GO:0005605 basal lamina |
| InterPro families | IPR008211 Laminin, N-terminal |
| Orthology group | MCL18649 |
Nucleotide sequence:
ATGTATAAAAAAATAAATTCCCAAGAAATGCATATTCAATCCAAATATATAAGTTCAATA
ATAAAACAAGACTTGAATCAAAAGACTCTCGCAGTTATTAGCGCTAATGCAACTTGTGGA
GATAATGGAGCAGAGGAGTTCTGCAGGGAGACTGCGGGAAAACGGGTTGTAGTATGTGAT
GTGTGTGAGGGTCCTGAAGGCCCGTCATCTCGTCGTCACCCTGCAGGTCTGGCCGTGGAC
GGTGACCCATCCACTTGGTGGCAGAGTCCTATCATCACTGATGGCAACTACCAGAATGTG
GAACTAGTAGCTGTTTTACCCGGGACACTGGGACTATCACATGAGTGGCGTTACAGCTAC
ATAAGCCCTATTTCCAAAGGCAGGGGCAGTGTTCAAGATTGTGGTAGTTATAGGGGCGTT
AAGATCGTGACTCACACCATGAAGCTCTTTGAGCGCATGATCGACCTCATGCTCCGCCGA
GAGCATACTGACTCAGATTTCAGCCAGGATCGGCTAATTTGGATGCCATTTTTGACATCA
GAACTCTGA
Protein sequence:
MYKKINSQEMHIQSKYISSIIKQDLNQKTLAVISANATCGDNGAEEFCRETAGKRVVVCD
VCEGPEGPSSRRHPAGLAVDGDPSTWWQSPIITDGNYQNVELVAVLPGTLGLSHEWRYSY
ISPISKGRGSVQDCGSYRGVKIVTHTMKLFERMIDLMLRREHTDSDFSQDRLIWMPFLTS
EL