| New model in OGS2.0 | DPOGS213497 |
|---|---|
| Genomic Position | scaffold4140:- 12763-14576 |
| See gene structure | |
| CDS Length | 825 |
| Paired RNAseq reads | 93 |
| Single RNAseq reads | 304 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004378 (6e-135) |
| Best Drosophila hit | CG10657 (1e-84) |
| Best Human hit | retinaldehyde-binding protein 1 (1e-23) |
| Best NR hit (blastp) | GI12324 [Drosophila mojavensis] (3e-98) |
| Best NR hit (blastx) | PREDICTED: similar to CG10657-PA isoform 1 [Apis mellifera] (4e-89) |
| GeneOntology terms | GO:0016918 retinal binding GO:0005622 intracellular GO:0005215 transporter activity GO:0006810 transport |
| InterPro families | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal IPR008273 Cellular retinaldehyde-binding/triple function, N-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport |
| Orthology group | MCL16923 |
Nucleotide sequence:
ATGAGACACTTCATTGAGAAACATCCCGCTATTAAGAAATGCAGAACCGACGCACCATTT
CTACTTCGTTTCCTGCGCACCAAGAAATATTCTATACCACAAGCCTGCTCAATGCTGGAA
CGATATCTCACTATAAGACAAATGTACCCGCAGTGGTTCCAAAAGTTGGATCCGTTAGAC
CCAAAAATAGCCGCAGTGATCGAAGCCGGGTACCTGCTACCCCTACCTAAAAGAGATGCC
GAGGGACGTAGAGTTGTGTTGTCTTGCATGGGTCGTTTCGATCCTTATAAGTTTGACAAC
TGCGTAATGGCGCGTGTACACTCTATGATCGTGGAGCTGTTATTGGACGAGCCGCGATCA
CAACTACTAGGTTACACACACGTCAACGACGAAGCTGGCATGCAGATGCCGCACGTTAGT
CTATGGTCGTTGAACGATGTCCGAATCATGCTTAACTGTATACAGAACTCAACCCCAATG
CGACACAAACGCACTCATTTTGTAAACATTCCTCATTACGGTGTTAAGATCTTTGAATTC
GCCGTCTCATTGCTTAGCGACAAACTCAAAGATCGTGTGATGTTCCATCGCTCAGCTGAA
GAATTGTCTAAATTCGTCGACCCTGCTATATTACCGAAAGAATATGGCGGAACAGTTCCA
TTAAAAGACATGATCGACGAACTCAAACGAAAACTTTTGAAACACAGAGAAGAGTTACTC
GCCTTGGACGATATGTGCATCGATCTGTATGCGCTCGAGAAAAATGATTTAACTCAAGAC
TTACACTCAACTGCTGGGTCGTTTAGGAAGCTAGAGCTAGATTAA
Protein sequence:
MRHFIEKHPAIKKCRTDAPFLLRFLRTKKYSIPQACSMLERYLTIRQMYPQWFQKLDPLD
PKIAAVIEAGYLLPLPKRDAEGRRVVLSCMGRFDPYKFDNCVMARVHSMIVELLLDEPRS
QLLGYTHVNDEAGMQMPHVSLWSLNDVRIMLNCIQNSTPMRHKRTHFVNIPHYGVKIFEF
AVSLLSDKLKDRVMFHRSAEELSKFVDPAILPKEYGGTVPLKDMIDELKRKLLKHREELL
ALDDMCIDLYALEKNDLTQDLHSTAGSFRKLELD