| New model in OGS2.0 | DPOGS201546 |
|---|---|
| Genomic Position | scaffold294:+ 50733-52264 |
| See gene structure | |
| CDS Length | 879 |
| Paired RNAseq reads | 383 |
| Single RNAseq reads | 1083 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002730 (2e-118) |
| Best Drosophila hit | CG2254 (2e-50) |
| Best Human hit | epidermal retinol dehydrogenase 2 (3e-29) |
| Best NR hit (blastp) | epidermal retinal dehydrogenase [Bombyx mori] (2e-120) |
| Best NR hit (blastx) | epidermal retinal dehydrogenase [Bombyx mori] (5e-115) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0005488 binding GO:0005811 lipid particle |
| InterPro families | IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase |
| Orthology group | MCL18457 |
Nucleotide sequence:
ATGGTGGATGTTGTGTGGGTGTTGGTGAATGCCACATATGCTGTAATAAAGGCAGTTCAT
GAGGTTTTTAAACCTCCACCAATGAAATCTGTTGATAATGAAAAGGCCATGGTGATTGGT
TCTGGAAGAGGTATTGGTCGTGATTTAGCCATACAACTATCATATCTTGGAGCAACAGTT
ATATGTGTGGATATCAACGAAATAAATAATAGTAAGACTGTAGCTTACATTAAACGGAAA
GGTGGAGATGCCTTTATGTACACATGCGATATCACGAAGAAAGAGAATGTTGATGATCTA
GCACAAAAAGTGAAGACTGAGTTAGGTTTTGTTAGCATGTTGTTCTATTGCTGTGGCATC
CCGAGCCCTAGATCATTACTGATGGCACCCAATGAAGATATTCATGGAACATTAGATCTG
ACTTTAACGTCTTACTTTTGGCTCATCGATAACTTTCTGCCGGAAATGAAAGCGAGGAAT
CATGGTCATATAGTAGCCCTGACTTCGGTAGCTGGACTCAGTTACATCAAAGATCAGATG
CCACTCTGTGTAGCACAGTTTGCTGTTCAGGGTCTGGCTGAATCTCTGATGGAGGACCTA
AGGATCAATAAAATTAATGGTGTTCATGTCACATTGACACACATCTATCCATTCATTGTA
GAGGATAACTCTGAGTTTAATTTAAAAATTTCTAGTTATTTCGGCACTATTACTCCAGCA
AAGGCAGCCAGTTCTGTTCTAGAGGGAGTTCTTCGAAATTATCCTGAGACTTCAGTACCT
AAACATTTTCTGTTTCTTGGTCATGTATTACGCATTCTTCCCAGAAAAGCGACTGTGCTT
GTTAGGGACCTCTTAGACACTGGTGTGGATTTTGCTTGA
Protein sequence:
MVDVVWVLVNATYAVIKAVHEVFKPPPMKSVDNEKAMVIGSGRGIGRDLAIQLSYLGATV
ICVDINEINNSKTVAYIKRKGGDAFMYTCDITKKENVDDLAQKVKTELGFVSMLFYCCGI
PSPRSLLMAPNEDIHGTLDLTLTSYFWLIDNFLPEMKARNHGHIVALTSVAGLSYIKDQM
PLCVAQFAVQGLAESLMEDLRINKINGVHVTLTHIYPFIVEDNSEFNLKISSYFGTITPA
KAASSVLEGVLRNYPETSVPKHFLFLGHVLRILPRKATVLVRDLLDTGVDFA