| New model in OGS2.0 | DPOGS201237 |
|---|---|
| Genomic Position | scaffold687:- 12935-19945 |
| See gene structure | |
| CDS Length | 933 |
| Paired RNAseq reads | 13 |
| Single RNAseq reads | 29 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012499 (3e-59) |
| Best Drosophila hit | CG34031 (2e-28) |
| Best Human hit | barH-like 2 homeobox protein (7e-14) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (2e-42) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (8e-42) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0005634 nucleus GO:0030528 transcription regulator activity |
| InterPro families | IPR020479 Homeobox, eukaryotic IPR000047 Helix-turn-helix motif, lambda-like repressor IPR001356 Homeobox IPR012287 Homeodomain-related IPR017970 Homeobox, conserved site IPR009057 Homeodomain-like |
| Orthology group | MCL17914 |
Nucleotide sequence:
ATGAACTCTATAGATTATATATCTAGCACGTGTGAGAATGATACAGGGAAGTTTGATAAT
AATGTCAGTGTCACGAATGATTTGACGGAGGAACGTACAGAGATACGGACATTCGTGGAA
TCGGATTCCGATTTGGACAGTGAAAATGAAACCGTCGATGTCATATGTGAGAACAGTGAA
CAAATGAATAGTATTAATTACAATACAATAGCTTACGGCTCCGTCGATAGTATTATATAC
AGCAAAAACTTATACGCTAACAAAATGACGGTGAAAAAGAAACGGGTTTGTGATAGTGAA
CAAATTAAAATTATAAACGATTCCGCAAACAGTTTATTACAGGCGAAGGGGAAAAACTTT
CTGATAGACAGTATACTAGGCAACGACGAGAGTAAAACTCAAAGAAAACTCGTCAAAGAC
GCCGATAACCCAGAGGAGACGGGAGACGAACATAATGTGTCATCAACCTCAACATGTCCG
GACATCTCCATCAACAGTGCTGATGTCTTGGCGGGACATGCGTACGCGCATTGGCTGGCG
ACACAACAACCTACTTTTTATGATGACAAAAATAATCGGAGGCAGAAACGTTCCGGACCA
GAGAGGAAACCTCGACAAGCATACAGCGCTAAACAACTAGAGAGACTCGAATCTGAATTT
AAGTTGGACAAATATCTGAGCGTATCAAAAAGATTGGAGCTCTCCAAGGCGCTCGGACTC
ACTGAGGTTCAAATAAAAACGTGGTTTCAAAATCGAAGGACAAAATGGAAGAAACAACTC
ACATCTCGTCTCAAGATCGCCCAGCGTCAGGGATTATTTCCCGGACATATCTTCGGACAC
GCCCCTCAGACTTATTCACTTATAAATCCTTATACCTACAGTCCATTAAGCTGCATGTTC
ACCCCCGTGACGTTGCCGACGTCGCAACCATGA
Protein sequence:
MNSIDYISSTCENDTGKFDNNVSVTNDLTEERTEIRTFVESDSDLDSENETVDVICENSE
QMNSINYNTIAYGSVDSIIYSKNLYANKMTVKKKRVCDSEQIKIINDSANSLLQAKGKNF
LIDSILGNDESKTQRKLVKDADNPEETGDEHNVSSTSTCPDISINSADVLAGHAYAHWLA
TQQPTFYDDKNNRRQKRSGPERKPRQAYSAKQLERLESEFKLDKYLSVSKRLELSKALGL
TEVQIKTWFQNRRTKWKKQLTSRLKIAQRQGLFPGHIFGHAPQTYSLINPYTYSPLSCMF
TPVTLPTSQP