| New model in OGS2.0 | DPOGS207596 |
|---|---|
| Genomic Position | scaffold150:- 94481-96283 |
| See gene structure | |
| CDS Length | 948 |
| Paired RNAseq reads | 271 |
| Single RNAseq reads | 819 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004673 (4e-167) |
| Best Drosophila hit | early girl (4e-133) |
| Best Human hit | E3 ubiquitin-protein ligase NRDP1 isoform 1 (2e-111) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (4e-153) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (6e-154) |
| GeneOntology terms | GO:0016567 protein ubiquitination GO:0031386 protein tag GO:0016881 acid-amino acid ligase activity GO:0008270 zinc ion binding GO:0005515 protein binding GO:0051445 regulation of meiotic cell cycle |
| InterPro families | IPR001841 Zinc finger, RING-type IPR008974 TRAF-like IPR003613 U box domain IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013323 Seven In Absentia Homolog-type IPR017907 Zinc finger, RING-type, conserved site IPR015036 USP8 interacting IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL14691 |
Nucleotide sequence:
ATGGGCTTTGAAATCAAAAGGTTTCAAGGTGACGTCGACGAAGAACTTATTTGCCCTATT
TGTTCGGGAGTTCTAGAAGATCCATTACAGGCACCTGCATGCGAGCATGCATTTTGCCGT
GTCTGCATAACTGAGTGGATAAGTCGCCAACCGACTTGCCCAGTGGACAGGCAGGCTGTT
ACCGCATGTCAGCTAAGACCCGTTCCTAGAATACTACGCAACCTGCTATCTAGATTATGC
ACAAGTTGCGACAACTCACCTCATGGATGCAATGCTGTGCTGAAACTGGACTCACTGGCA
TCACATTTAGTTGAATGCGAATTTAACCCTAAGCGGCCAATGCCTTGTGAAGCAGGCTGT
GGTTTAGTCATACCGAAAGATGAGCTGGCAGAGCACAACTGTGTGCGAGAGTTGCGTGCA
TTAATAACTTCCCAGCAGGGTAAGCTCACGGACTACCAGCAGGAGCTAGCAGAACAAAGA
CTGGTCATCAATGAACACAAAAGGGAATTGGCTCTACTTAAAGAGTTCATGCGTGCAATG
CGTGTGTCAAATCCTACAATGCGAGCACTAGCCGATCAGATGGAGCGTGACGAAGTTGTG
CGGTGGGCTGGATCACTAGCCAGGGCCAGAGTCACCCGCTGGGGTGGCATGATCTCTACA
CCTGATGACGTCCTGCAGATGATGATTAAGAGAAGCTTATCAGAATCTGGATGTCCTCCA
CACATTATTGATGATCTGATGGAAAATTGCCATGAGAGGCGATGGCCACCTGGTCTCTCT
TCCTTAGAAACTAGACAGAACAATAGAAGATTATATGAAAAATATGTATGCAAAAGAGTT
CCTGGAAAGCAAGCGGTACTAGTCTTGCAGTGTGACAATACTCATGTCGATGAACATATG
ATGGTAGAACCTGGTCTTGTAATGATATTTGCTCATGGCATTGAATAA
Protein sequence:
MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRVCITEWISRQPTCPVDRQAV
TACQLRPVPRILRNLLSRLCTSCDNSPHGCNAVLKLDSLASHLVECEFNPKRPMPCEAGC
GLVIPKDELAEHNCVRELRALITSQQGKLTDYQQELAEQRLVINEHKRELALLKEFMRAM
RVSNPTMRALADQMERDEVVRWAGSLARARVTRWGGMISTPDDVLQMMIKRSLSESGCPP
HIIDDLMENCHERRWPPGLSSLETRQNNRRLYEKYVCKRVPGKQAVLVLQCDNTHVDEHM
MVEPGLVMIFAHGIE