| New model in OGS2.0 | DPOGS207547 |
|---|---|
| Genomic Position | scaffold150:+ 56040-57704 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 255 |
| Single RNAseq reads | 811 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009985 (9e-33) |
| Best Drosophila hit | ND |
| Best Human hit | BRCA1-A complex subunit BRE isoform 3 (4e-27) |
| Best NR hit (blastp) | RecName: Full=BRCA1-A complex subunit BRE; AltName: Full=Brain and reproductive organ-expressed protein; AltName: Full=BRCA1/BRCA2-containing complex subunit 45 (1e-42) |
| Best NR hit (blastx) | RecName: Full=BRCA1-A complex subunit BRE; AltName: Full=Brain and reproductive organ-expressed protein; AltName: Full=BRCA1/BRCA2-containing complex subunit 45 (3e-37) |
| GeneOntology terms | GO:0005634 nucleus GO:0006302 double-strand break repair GO:0010212 response to ionizing radiation GO:0031572 G2/M transition DNA damage checkpoint GO:0031593 polyubiquitin binding GO:0045739 positive regulation of DNA repair GO:0070531 BRCA1-A complex GO:0070552 BRISC complex |
| InterPro families | IPR010358 Brain/reproductive organ-expressed protein |
| Orthology group | MCL18055 |
Nucleotide sequence:
ATGTCTGTAGATAATTTAGGATTCCTGAATGAAATCTCTCCTATGTTTCGACCTTACATT
CAGAGTATATACCAGGATTTAAAACTAGGTCTCTGCAAAGCCAAGGTAGATTTGGAAAGA
ATCGGCGGTAATTCAAGTGGAGCTGAGAGTCAGTTTAGATTGGTGCTTCCTTACTGTTCA
AAAAAATTAAAATGGGATGTAATATTTGATACTTCGACGCCATGGTTTGCACCTGACTTT
CGATTTGATGATGACAGTTTCTTGAGCAGTGCAAATGAAGATTATTTAACAAAAAGTGTT
CCTAGTTTGACTAATTGGGATGCAAATAATCCAAAATCACTTGGCGATGTTTTATCGGAA
TTGATTAAATTGTATAAAATACATCAGGTCCGAAAGCTCCATGAAGATGCAAACTCTCGA
GCATCTTTCGAATACAGTGCCTTGATGGGGAATGCTCTGACAACAGAGAAAGATGTAGAG
GTGTGGGTTGGTGGACATATTGTTGAATTTCTTATTAAGCTTAAAGTGGATGTCTTACGA
TTACCAGAATTATATAATGATGGGACTGAACAAAATCCAGGCATAGATACAGCTCTGTTA
CTTGTTAGATATCCAAATTCAACAAATGCAGAATTAATTTTATCACCGTTTCTGACTAAA
GTTCTTGGAAAAATCACATTACCAATGATGCACCACTCAGGGGTACTCATGGATTATGTT
CCACTAGTTACAGAGATTTTAAACAATAAAATATATCACCTTCTTAATAATGACAAACTA
AAACGAGATCTACTAGCTCAGTTAATTGTAAAATATGAAGGTGCAATATTAGAACATGAT
GCAAGCAGTGCTGCCCTCTTGTTACAAATGAATGATTTTTATTGGATATTGCAAGTTGAT
ATTGGTATCAAATTCCCAGAAAAACCACCAGTACTAACACTCAGATCTGTATATTACTCT
TCAAAAGGAAAACCTAAGTTTAAAGTGCTACCCAATTGTCCATACACCAATTTCGAAGGA
TACATAATGCAGCAAGTAGAAATATTTAAAAATGAATGCAAAGGAATAACTCAGAGCCAA
CAAATAATAAGCATTGACAACTGA
Protein sequence:
MSVDNLGFLNEISPMFRPYIQSIYQDLKLGLCKAKVDLERIGGNSSGAESQFRLVLPYCS
KKLKWDVIFDTSTPWFAPDFRFDDDSFLSSANEDYLTKSVPSLTNWDANNPKSLGDVLSE
LIKLYKIHQVRKLHEDANSRASFEYSALMGNALTTEKDVEVWVGGHIVEFLIKLKVDVLR
LPELYNDGTEQNPGIDTALLLVRYPNSTNAELILSPFLTKVLGKITLPMMHHSGVLMDYV
PLVTEILNNKIYHLLNNDKLKRDLLAQLIVKYEGAILEHDASSAALLLQMNDFYWILQVD
IGIKFPEKPPVLTLRSVYYSSKGKPKFKVLPNCPYTNFEGYIMQQVEIFKNECKGITQSQ
QIISIDN