| New model in OGS2.0 | DPOGS213058 |
|---|---|
| Genomic Position | scaffold2623:- 30557-33464 |
| See gene structure | |
| CDS Length | 1458 |
| Paired RNAseq reads | 434 |
| Single RNAseq reads | 1167 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007676 (0.0) |
| Best Drosophila hit | CG7288 (0.0) |
| Best Human hit | U4/U6.U5 tri-snRNP-associated protein 2 (5e-176) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin specific protease 39 and snrnp assembly factor [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin specific protease 39 and snrnp assembly factor [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0004221 ubiquitin thiolesterase activity GO:0008270 zinc ion binding GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR001607 Zinc finger, UBP-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| Orthology group | MCL12522 |
Nucleotide sequence:
ATGAGTAATGGAGATACAATGAAACGGAAACTTAGCGGTGAAAATGGTATAGAGGCTACA
GAACCAGCAATTAAAAGTAGCAAGACTCACATTCAGTGTCCCTATTTGGATACTATTAAT
AGGCATGTGTTGGATTTTGACTTCGAAAAATTGTGCTCCGTTTCTCTTACAAGAATAAAT
GTATATGCTTGTCTGGTCTGTGGGAAGTACTTCCAGGGCCGTGGTACTAATACACATGCA
TACACACATTCTGTAGCAGAGGGCCATCATGTGTTCCTCAATTTGCATACTCTTAAATTT
TACTGTCTACCAGATAATTATGAAGTCATTGATTCATCTCTCAATGATATAAAATATGTT
TTGAATCCCATCTTCACACCGGACCAAATAAAGCAGTTGGACCAAAATATTAAAATGTCA
AGAGCAATAGACGGAACCATGTATATGCCTGGTATAGTCGGACTTAACAATATCAAGGCC
AACGATTACTGTAATGTTATATTACAGTGTTTAGCACAAGTGAGACCACTTCGTAATTAC
TTTCTACGGGAAGAAAACTATGCTGATGTGAAAAGGCCTCCTGGTGATTCTTCATTCCTG
CTGGTGCAAAGATTCGGTGAACTTTTGCGTAAGCTCTGGAATCCCAGAGCATTTAAAGCC
CATGTGTCTCCTCATGAGATGTTGCAAGCTGTTGTGTTGTGGTCTAAAAAGAGATTTCAA
TTCATCAAACAGAGTGATCCGATCGATTTTCTATCTTGGTTTCTCAACTCGCTCCACATG
GCCTTGAATGGAACCAAAAAGCCAAACAGTTCCATAATATATAAATCTTTTCTTGGTCAC
ATGAGAATATATACTAGGAAACTACCTCCCCCAGATGCTGATGAGGCAGCAAATGTGGAC
TTAAATAGTGAAGAATATAACGAAATGATAACAGAATCACCATTTCTTTATTTAACATGT
GACTTACCTCCAACACCGCTTTTTACTGATGAATTTAGGGAAAATATTATCCCTCAGGTT
AATCTCTATCAGCTTTTATCAAAATTTAATGGGCAAGCATCGAAAGAATATAAAACGTAC
AAGGAGAATTTCCTAAAAAGGTTTGAAATAACCCAACTTCCACCGTACCTGATATTATAT
ATAAAGAGATTCACGAAAAACACATTCTTTGTAGAAAAGAATCCCACTGTTGTTAATTTT
CCAGTGAAGAATGTTGATTTTGGAGATATTCTTACGCCTGAAATAAAAGCAAAACACAAT
GGCAAAACTATATACGAGCTTGTTGGTAATATAGTACATGACGGAACACCCGAGAAAGGC
ACTTATAGAGCTCATGTGCTGCACACACCTACACAGCAATGGTATGAAATGCAAGATCTT
CATGTAACCAGCATTTTGCCGCAAATGATCACTCTCACAGAAGCTTATATACAAGTGTAT
GAATTGAAACAGGATTAA
Protein sequence:
MSNGDTMKRKLSGENGIEATEPAIKSSKTHIQCPYLDTINRHVLDFDFEKLCSVSLTRIN
VYACLVCGKYFQGRGTNTHAYTHSVAEGHHVFLNLHTLKFYCLPDNYEVIDSSLNDIKYV
LNPIFTPDQIKQLDQNIKMSRAIDGTMYMPGIVGLNNIKANDYCNVILQCLAQVRPLRNY
FLREENYADVKRPPGDSSFLLVQRFGELLRKLWNPRAFKAHVSPHEMLQAVVLWSKKRFQ
FIKQSDPIDFLSWFLNSLHMALNGTKKPNSSIIYKSFLGHMRIYTRKLPPPDADEAANVD
LNSEEYNEMITESPFLYLTCDLPPTPLFTDEFRENIIPQVNLYQLLSKFNGQASKEYKTY
KENFLKRFEITQLPPYLILYIKRFTKNTFFVEKNPTVVNFPVKNVDFGDILTPEIKAKHN
GKTIYELVGNIVHDGTPEKGTYRAHVLHTPTQQWYEMQDLHVTSILPQMITLTEAYIQVY
ELKQD