New model in OGS2.0 | DPOGS213657  |
---|---|
Genomic Position | scaffold5407:- 2005-3090 |
See gene structure | |
CDS Length | 1086 |
Paired RNAseq reads   | 1098 |
Single RNAseq reads   | 3816 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010868 (5e-144) |
Best Drosophila hit   | ventral veins lacking, isoform B (1e-92) |
Best Human hit | POU domain, class 3, transcription factor 3 (3e-80) |
Best NR hit (blastp)   | silk gland factor 3 [Bombyx mori] (6e-164) |
Best NR hit (blastx)   | POU-domain transcription factor [Helicoverpa armigera] (9e-174) |
GeneOntology terms    | GO:0007422 peripheral nervous system development GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0007425 epithelial cell fate determination, open tracheal system GO:0005515 protein binding GO:0048813 dendrite morphogenesis GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding GO:0008045 motor axon guidance GO:0007420 brain development GO:0035284 brain segmentation |
InterPro families    | IPR017970 Homeobox, conserved site IPR000327 POU-specific IPR001356 Homeobox IPR010982 Lambda repressor-like, DNA-binding IPR009057 Homeodomain-like IPR012287 Homeodomain-related IPR013847 POU |
Orthology group | MCL11971 |
Nucleotide sequence:
ATGGCGGCGACCACGTATATGCCGGGAGAGCTGGATCTCGGCAGCATCAGCGGCTATCAC
GCTGCGTCGCCGCGCAGCGCTGAGCCGGCTGACATGAAGTACCAGCACCACCTGCACGCA
AGCGGGTCTCCTTCGCCAGGCGCGCCCGTGGGTCTAAACCCGTGGGCTTCGCTACCGCCT
GGTGATCCCTGGTCCATGCATCAGCACCACACTCATGTGCATCAACCTGACGTTAAGCCA
CCGGCTGCTCCACACGATCACCGTCACTTGCAAGGCCATGGCTGGCATGCACCGGTTGTA
TCAGCACATTACGGCGCTGTTTCGCCCTATCCGGTGCCCATGCACCAGCATCACATGCTG
CGGGATGTGCAGCCCTCGCCGCATCCCATGCATCATCATCACGCGCTCGAACGTGACCAG
CCAGAAGAGGACACACCGACCAGTGATGACCTAGAAGCGTTTGCCAAACAATTTAAGCAA
CGCCGTATCAAACTCGGCTTCACGCAGGCTGACGTAGGTCTCGCATTAGGAACCCTTTAT
GGCAATGTGTTTTCTCAAACAACGATATGCCGATTCGAGGCTCTACAGCTCAGTTTCAAA
AACATGTGTAAATTGAAACCACTTTTGCAAAAATGGCTAGAGGAAGCCGACTCTACGACG
GGTAGTCCGACTAGTATCGATAAAATAGCCGCCCAGGGTCGCAAGAGAAAGAAGCGAACA
TCCATCGAAGTGTCAGTGAAGGGTGCGCTAGAACAACACTTTCATAAGCAGCCAAAACCC
TCCGCCCAAGAGATCACGAGTCTCGCAGATAGTTTACAACTAGAGAAGGAGGTAGTCAGA
GTATGGTTTTGTAATCGTCGGCAAAAGGAAAAGAGGATGACGCCGCCGAACACGTTAGGC
GGTGAGATGTTGGACGGAATGGGCCACGGGCACTACGGGCACGACGTGCATGGCTCACCA
CCGCTGCATGCTCACTCGCCGGCGCTGTCACCACACGCGCAGCACGGCCAGCACGCACCG
CACGCGCCGCACTCGCAGCACCCGCAACACGGCCTCCAGAGCGCGCACACCCTAGCCGCA
CACTAA
Protein sequence:
MAATTYMPGELDLGSISGYHAASPRSAEPADMKYQHHLHASGSPSPGAPVGLNPWASLPP
GDPWSMHQHHTHVHQPDVKPPAAPHDHRHLQGHGWHAPVVSAHYGAVSPYPVPMHQHHML
RDVQPSPHPMHHHHALERDQPEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY
GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRT
SIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLG
GEMLDGMGHGHYGHDVHGSPPLHAHSPALSPHAQHGQHAPHAPHSQHPQHGLQSAHTLAA
H