| New model in OGS2.0 | DPOGS202925 |
|---|---|
| Genomic Position | scaffold301:- 15592-49287 |
| See gene structure | |
| CDS Length | 2499 |
| Paired RNAseq reads | 1053 |
| Single RNAseq reads | 2632 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001913 (8e-145) |
| Best Drosophila hit | CG6232, isoform B (2e-61) |
| Best Human hit | thrombospondin type-1 domain-containing protein 4 precursor (3e-57) |
| Best NR hit (blastp) | GJ13841 [Drosophila virilis] (9e-86) |
| Best NR hit (blastx) | GJ13841 [Drosophila virilis] (7e-81) |
| GeneOntology terms | GO:0005578 proteinaceous extracellular matrix GO:0008270 zinc ion binding GO:0004222 metalloendopeptidase activity |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat IPR010909 PLAC IPR010294 ADAM-TS Spacer 1 |
| Orthology group | MCL12408 |
Nucleotide sequence:
ATGGAAGACGTTTTAAAGAATGGTAATGCGTTTACCGAAAGCTACAAGCGAGCTTTAAAA
ATCCTTAAAAGTAAAAAGTATATTGCTCTCGTTGTATTCATCGCTGTGTTCTTGAGGAAG
CAGTTAACATACGCACAAACAAACACAGAAGTCGGTTTCCCATTAAACAACAGCAATAAA
AGTGCTACAATATACGCCTGGAGTACTTGGGGTAGCTGGAGTTCCTGTTCAAGGTCATGT
GGTGGAGGAGTCGCTGTTCAAGAGAGACACTGTCTACCCAGGGATCCTACACGGTGGCGC
CGCAGCAGGAAGAGAAGGAAACTGGGCAGAGAGGACAGATCGCGTCGAGCTCGTACTGCC
AACAGTGTTGTGAATGTCCCAGATTGTGCCGGACTCGGAAGACGATACCACGAGTGTAAT
ACAGAGCCATGTCCGGGATCGTATCTGGATTCTCGCGGGGAACAATGCGCGATGTACGAC
CGGAGGCCGTTTCGAGGCAGGTTCTATACATGGGTGCCGTACGTCGACGGAAACGCCCCA
TGTATTCTCAACTGCCGGCCTCGTGGACAGCAGTTCTACGCTTCACTAGCCCTAGTCGCT
GATGGAACTTCCTGCACAAAACCCGGTTACCGCGCTATATGTGTTCAGGGCTCCTGTAAG
GTGGTAGGTCGTGAAGAGGTGCTAGCATCGACTGCGACAAGAGACGTCCAGTGCGGGCGT
CACCTTGTTTCTGGTCTGTTCTCCCGACCTCGTCTTCCCTTGGGATACTCCTCCGTCACC
ACAGTGCCGACCGGCGCTTGTAGACTTAATGTCTCCGAAGTTGTCGCCAGCGAAAATTAC
ATCGCACTAAGAGTATCCAACGGTTCATATATTGTAAACGGTGAGTTTGCTGTTAGTGCT
CCTGGTACGTACGAGGCGGCGGGTGCAAGATTTGTATACTCTCGGTCTGCCGGACTAGAC
AATATATTTGCTATGGGACCCATACACCAACCTATTGATATTATGGTTTTATATACGCAA
CCAAACCCGAACATAAAATACGAATATCTTACCGATTCGCTGCCTAATGAAACGAGCAAC
GACATTCCGAATGATATCACCAGTTCTGCCCATCATCAGATGCAAAGGCATCACCGCCAT
CACGTGGCAGAATCCCACACGAGGGCCTTAGAAAAGTCAGGACCATCTTTGTCGAAGCAA
CCAGAAGCAAGTTCTTCTGAAACACAATATCAATTGGACACGAATGTTATTGGCGATAGA
ATATTTGTATGGAAAGTAATGTCATACACGCAATGTTCAAGAACTTGTGGTGGCGGCCTT
CAAATTGGGAAATTTAAATGTGTCGAAGTAGACGGCAAAGAAGACCGCGAAGTGTCTGCT
GCTCATTGCAAAGGGTCTCCACCGCCGTCTCGACGTAGAAGATGTGGCGTTGTTCCTTGT
CCCCCTCGATGGAGGGCTGCCGCTTGGGGTCCCTGCCCTGTTTGCGGTCCAGCTCATAGG
ACTAGAATAGTTGGATGTGTACAAGATCATGCTCGAGGAATCACAAAGATAAGCGATCAA
AAATGTCCTCTACCTATGCCACCAAGTAAGGAACCTTGTGATATACCGAATTGTGATGGA
ACTGCTAGAACAGACAGCACACCACGTCTCGATGGGAGACGTCACGTAAATCCTTACGAT
CGTGTTGATGCATTCCATGAAACAAAACCAAAGGTGACACTCGCTAACAACGTATCTGCT
ATCGAGGTTCATCCAAAACATGAATCCAAGTACACTCACAGTGCAGCTGGTGGATGGCTG
TATACTGAATGGTCTCAGTGTGTCGGTTGGTGTGCGAGCGGTGTTCAGTCCCGCGGCGTC
CGTTGCTCGGAGCCTGATGGATGCTCCGCCCACGCCCCGGCCTCTTCGCAGGCCTGCTCA
GTAAAGAAACCATGTGAGGCGCAATGGTTTACTGGAGAGTGGTCTCCATGTACCGCTGAA
TGTGATGGAAGACAAATAAGAGGAGTCATTTGTATCGGAGGAAACGGAAGGAGATTGAGA
GATGGTTCCTGCAAAACACCAAAACCTGAAGCCGAAAGACCATGCGGTGGAACCTGTGCA
CCGTCTTGGTATCTCAGTGACTGGGGGGAGTGCACAGGTCCATGTGAGGCTGGTATTCAG
ACTCGTACTGTGTGGTGTGCTCGTGGCGGGGCGGGGGGTGCTGGTGGCGCTGGCTCAGCC
AGAGATCTGGAGTGCGGCGGAGGTAGACCACCAGCTAGGAGGTCCTGTGTACCAGCTAGG
TGCACCACTAGACCGGTGAAGCCGGCCGTGATCACACCCACAGACCCGCAACGAGTCACG
AGACATCAAACTCAGAACACGCAGAACGTCAAGGAACGGTCGTATAGAAACGGAACGTGT
ACCGACAAGTTGAGCAATTGCTCGCTGGCGGTGCAAGCGCGTCTCTGTCACTACCGCTAC
TACGCTGATAGCTGCTGTCGCTCCTGTCACGGACGGTAG
Protein sequence:
MEDVLKNGNAFTESYKRALKILKSKKYIALVVFIAVFLRKQLTYAQTNTEVGFPLNNSNK
SATIYAWSTWGSWSSCSRSCGGGVAVQERHCLPRDPTRWRRSRKRRKLGREDRSRRARTA
NSVVNVPDCAGLGRRYHECNTEPCPGSYLDSRGEQCAMYDRRPFRGRFYTWVPYVDGNAP
CILNCRPRGQQFYASLALVADGTSCTKPGYRAICVQGSCKVVGREEVLASTATRDVQCGR
HLVSGLFSRPRLPLGYSSVTTVPTGACRLNVSEVVASENYIALRVSNGSYIVNGEFAVSA
PGTYEAAGARFVYSRSAGLDNIFAMGPIHQPIDIMVLYTQPNPNIKYEYLTDSLPNETSN
DIPNDITSSAHHQMQRHHRHHVAESHTRALEKSGPSLSKQPEASSSETQYQLDTNVIGDR
IFVWKVMSYTQCSRTCGGGLQIGKFKCVEVDGKEDREVSAAHCKGSPPPSRRRRCGVVPC
PPRWRAAAWGPCPVCGPAHRTRIVGCVQDHARGITKISDQKCPLPMPPSKEPCDIPNCDG
TARTDSTPRLDGRRHVNPYDRVDAFHETKPKVTLANNVSAIEVHPKHESKYTHSAAGGWL
YTEWSQCVGWCASGVQSRGVRCSEPDGCSAHAPASSQACSVKKPCEAQWFTGEWSPCTAE
CDGRQIRGVICIGGNGRRLRDGSCKTPKPEAERPCGGTCAPSWYLSDWGECTGPCEAGIQ
TRTVWCARGGAGGAGGAGSARDLECGGGRPPARRSCVPARCTTRPVKPAVITPTDPQRVT
RHQTQNTQNVKERSYRNGTCTDKLSNCSLAVQARLCHYRYYADSCCRSCHGR