| New model in OGS2.0 | DPOGS211402 |
|---|---|
| Genomic Position | scaffold881:+ 48770-50420 |
| See gene structure | |
| CDS Length | 1317 |
| Paired RNAseq reads | 44 |
| Single RNAseq reads | 94 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010862 (2e-140) |
| Best Drosophila hit | CG17838, isoform C (7e-50) |
| Best Human hit | RNA-binding protein 47 isoform a (6e-65) |
| Best NR hit (blastp) | unnamed protein product [Tetraodon nigroviridis] (8e-75) |
| Best NR hit (blastx) | unnamed protein product [Tetraodon nigroviridis] (4e-72) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL19690 |
Nucleotide sequence:
ATGCGACTCATGATGGATTTCTCCGGCTCGAACCGCGGGTACGCATTCGTAATGTACACT
GAACGGGCAGAGGCCACGGCGGCCGTGAAGCAACTCAACGGCTACGAGATACGCCCGCGA
CGACACATCGGAGTCGTAAAGTCCGTGGATAACTGTCGCCTGTTCGTAGGAAACATTCCC
AAGACGAAGACCAAGGAGGACGTCAGGGAGGAGCTCTCCAAGCGCGTATCGGACATTGTG
GACGTCATACTGTACAAGAACTGTTTTGATCGAAAGCTGAACCGGGGCTTCGCCTTCGTG
GAGTTCACGTGTCACCGCGCAGCCGCTATGGCGAGGCGGGCGCTGGTGCCGGGCTGCGTG
AGACTCTGGGACCAGGAAGTCATGGTGGATTGGGCTGAACCAGAACCTGACATAGACGAC
GAGCAGATGCAAAGGGTGAAGGTACTGTATGTGCGTAATTTCGAGATTCGGACGACCCCG
GACGTGATCCAAAAGGTTTTCGAATCCACCATTAACCACAAAGTGGAACGAGTAAAAAAA
ATATATGACTATGCGTTCATACATTTTTACGAAAGAGAACACGCAGAGCTTGCTATAGCG
AAATTACAAAACGCAGACATCGACGGTAGTAACATTGAAATAAGATGGGCCAAGCCCGTC
GACCGCGACCTGTACCGCATACAGAAACTCAGTAGAGGCAATGCGAAGTTTAACAATAGC
TTGGATTTGACTCAAACCCTGTTGCTTTATAAACATCACATCGAAAAGCAGGAGTACGCA
AACGGTCCCAAGGACGAAGGCATCGGCTCGGCCTGCGCTGGGGGCAGTTCCTGTTGCTCT
CCGACAGACGCAAAGCCTCCAGTGTATTATCAGGCACCAGCTAACTATATTCTGGCAACA
GTTAAGCTGGAATCCATGTGCAAACGCTACATGTGGTCTCCACCAGTATATGACTATCAA
AAGTATGTGGATCCTACTGGCACAGAACTATGGGTGTGCCGTGTGGAGCTGCCTCAAGTG
GGTCTGCCGCTGTTGTCTGTTGCGCAACGTGTGGGTCCCCTTGCAAGCCGAGCATGCTTC
TCTCTTGAACAAGCTCATGTCGAGGCAGCAGAATTGGCCCTGCAGGCCTTGAAGATGTTG
AGAGTGGACCTGATCCACCAGTCTCCTGGTTCCCTGTACTCCATGCCTGCAGCTTGTGTC
GGTCTCCCTTGTGACTACCCGGTGTACTCGCTGGCGCCTGCTATTCCTGCTACACTACCT
GGTTCCTTGCCAGCTCCACTTTCTGCTCCAATACCAACTATTTGGCGTACTGTTTAG
Protein sequence:
MRLMMDFSGSNRGYAFVMYTERAEATAAVKQLNGYEIRPRRHIGVVKSVDNCRLFVGNIP
KTKTKEDVREELSKRVSDIVDVILYKNCFDRKLNRGFAFVEFTCHRAAAMARRALVPGCV
RLWDQEVMVDWAEPEPDIDDEQMQRVKVLYVRNFEIRTTPDVIQKVFESTINHKVERVKK
IYDYAFIHFYEREHAELAIAKLQNADIDGSNIEIRWAKPVDRDLYRIQKLSRGNAKFNNS
LDLTQTLLLYKHHIEKQEYANGPKDEGIGSACAGGSSCCSPTDAKPPVYYQAPANYILAT
VKLESMCKRYMWSPPVYDYQKYVDPTGTELWVCRVELPQVGLPLLSVAQRVGPLASRACF
SLEQAHVEAAELALQALKMLRVDLIHQSPGSLYSMPAACVGLPCDYPVYSLAPAIPATLP
GSLPAPLSAPIPTIWRTV