| New model in OGS2.0 | DPOGS213165 |
|---|---|
| Genomic Position | scaffold1131:- 42333-44248 |
| See gene structure | |
| CDS Length | 378 |
| Paired RNAseq reads | 7 |
| Single RNAseq reads | 231 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007350 (1e-29) |
| Best Drosophila hit | Vti1 (8e-10) |
| Best Human hit | vesicle transport through interaction with t-SNAREs homolog 1A (4e-10) |
| Best NR hit (blastp) | PREDICTED: similar to CG3279-PA [Apis mellifera] (7e-15) |
| Best NR hit (blastx) | PREDICTED: similar to CG3279-PA [Apis mellifera] (3e-07) |
| GeneOntology terms | GO:0015031 protein transport GO:0031201 SNARE complex GO:0016192 vesicle-mediated transport GO:0006886 intracellular protein transport GO:0042147 retrograde transport, endosome to Golgi GO:0008565 protein transporter activity GO:0005484 SNAP receptor activity GO:0016020 membrane |
| InterPro families | IPR010989 t-SNARE IPR007705 Vesicle transport v-SNARE, N-terminal |
| Orthology group | MCL14197 |
Nucleotide sequence:
ATGTCGACATTAATTCAATCATATGAACAACAGTATTCTATTCTTACGGCTGAAATTACT
GCAAAAATAGGGCGACTGAAGACAGCTCATGAAGATGACCGTGATCAATTATCAAGAGAG
ATTCAGTCAAATTTCGAGGAGGCCAATGATTTGTTGGAGCAATTGGAATTAGAATCTCGC
GGCTCCGGTGGAGGGTCAAGAGTTCCGGCCTACCGTGCTGAACTGCAACGAGTCAGGGAT
GAGTTCAGATCAGCTGCCCGACAATTGACTATGAGCGCCTGCGAAAAATATGCGAGCAAT
AACGCAAGGACTCGGGACGTGGTGAAGATAGGGTCTGTGCGTAACGAAGTGCGGGACGTG
CAACATCTGAATTTGTAA
Protein sequence:
MSTLIQSYEQQYSILTAEITAKIGRLKTAHEDDRDQLSREIQSNFEEANDLLEQLELESR
GSGGGSRVPAYRAELQRVRDEFRSAARQLTMSACEKYASNNARTRDVVKIGSVRNEVRDV
QHLNL