| New model in OGS2.0 | DPOGS213388 |
|---|---|
| Genomic Position | scaffold212:- 62026-72471 |
| See gene structure | |
| CDS Length | 1374 |
| Paired RNAseq reads | 7047 |
| Single RNAseq reads | 34220 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009132 (0.0) |
| Best Drosophila hit | beta-Tubulin at 60D (0.0) |
| Best Human hit | tubulin beta-3 chain isoform 1 (0.0) |
| Best NR hit (blastp) | beta-tubulin [Bombyx mori] (0.0) |
| Best NR hit (blastx) | beta-tubulin [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005525 GTP binding GO:0045298 tubulin complex GO:0005874 microtubule GO:0007409 axonogenesis GO:0007411 axon guidance GO:0007017 microtubule-based process GO:0005200 structural constituent of cytoskeleton GO:0030537 larval behavior GO:0009416 response to light stimulus GO:0007507 heart development GO:0003924 GTPase activity GO:0007018 microtubule-based movement GO:0051258 protein polymerization GO:0005198 structural molecule activity |
| InterPro families | IPR003008 Tubulin/FtsZ, GTPase domain IPR008280 Tubulin/FtsZ, C-terminal IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR000217 Tubulin IPR017975 Tubulin, conserved site IPR013838 Beta tubulin, autoregulation binding site IPR002453 Beta tubulin IPR023123 Tubulin, C-terminal |
| Orthology group | MCL10040 |
Nucleotide sequence:
ATGAGGGAGATCGTGCACCTCCAGGCCGGCCAGTGCGGGAACCAGATCGGCGCTAAATTC
TGGGAGATAATATCCGAGGAGCACGGCATCGACCCCACGGGAGTGTACAGAGGAACCAGC
GACCTGCAGCTCGAACGGATCTCAGTCTACTATAATGAGGCCTCTGTTGCGACGGCGGAG
AACGGGGGCAAGTACGTCCCCCGCGCCATCCTGCTCGACCTCGAGCCCGGGACTATGGAC
GCCGTGCGCTCCGGGGGCTACGGCCAGCTGTTCCGCCCGGACAACTTCGTCTTCGGTCAG
TCCGGCGCAGGGAACAACTGGGCCAAGGGTCACTACACAGAGGGAGCTGAACTCGTCGAC
GCCGTACTCGACGTAGTGCGCAAGGAGTGCGAAAACTGCGACTGTCTCCAGGGCTTCCAA
CTGACACACTCACTGGGAGGCGGCACCGGGTCCGGCATGGGCACGTTACTCATCTCCAAG
ATCAGAGAGGAATATCCCGACAGAATCATGAACACATACTCAGTTGTCCCCTCGCCCAAA
GTATCAGACACCGTCGTAGAACCTTACAACGCGGTGCTCTCCATCCATCAGCTAGTCGAA
AACACAGACGAAACATATTGCATAGATAACGAGGCCCTATACGATATCTGCTACAGAACA
CTCAAAGTGCCCAACCCGACTTACGGTGACCTCAACCATCTCGTGTCGCTCACCATGTCC
GGTGTCACCACCTGCCTCAGGTTCCCCGGTCAGTTAAACGCCGACCTCCGCAAGTTGGCC
GTCAACATGGTTCCCTTCCCCCGTCTCCACTTCTTCATGCCCGGATTCGCACCCCTGACA
TCTCGCGGCAGCCAGCAGTACCGCGCCCTGACCGTTCCCGAGCTCACTCAGCAGATGTTC
GACGCCAAGAACATGATGGCAGCCTGCGCCCCTCGCCACGGCCGCTACCTCACCGTGGCC
GCCATCTTCCGTGGTCGCATGTCCATGAAGGAGGTGGACGAGCAGATGCTCTCTATTCAA
AACAAAAACAGCAGCTTCTTCGTAGAATGGATCCCCAACAACGTGAAGACTGCCGTGTGC
GACATTCCTCCCAAGGGTCTCAAGATGTCTTCCACGTTCATCGGAAACACGACAGCCATC
CAAGAGCTGTTCAAGCGCATCTCGGAGCAGTTCACCGCCATGTTCAGACGTAAGGCTTTC
CTCCACTGGTACACCGGCGAGGGGATGGACGAGATGGAGTTCAACGAAGCAGAGAGCAAC
GTCAACGACCTGGTCTCCGAGTACCAGCAGTACCAGGAGGCGACGGCGGAAGACGACACG
GAGTTCGACCAGGAGGAGATGGAGGAGCTGGCGCAGGACGACCACCACGACTGA
Protein sequence:
MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE
NGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
AVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPK
VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS
GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMF
DAKNMMAACAPRHGRYLTVAAIFRGRMSMKEVDEQMLSIQNKNSSFFVEWIPNNVKTAVC
DIPPKGLKMSSTFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFNEAESN
VNDLVSEYQQYQEATAEDDTEFDQEEMEELAQDDHHD