New model in OGS2.0 | DPOGS207502  |
---|---|
Genomic Position | scaffold440:+ 282-6087 |
See gene structure | |
CDS Length | 1974 |
Paired RNAseq reads   | 72 |
Single RNAseq reads   | 210 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001924 (1e-08) |
Best Drosophila hit   | CG42330, isoform E (8e-167) |
Best Human hit | Down syndrome cell adhesion molecule isoform CHD2-42 precursor (8e-41) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC009254 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC009254 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005887 integral to plasma membrane GO:0007411 axon guidance GO:0008046 axon guidance receptor activity GO:0007422 peripheral nervous system development GO:0016319 mushroom body development GO:0007413 axonal fasciculation GO:0006909 phagocytosis GO:0051635 bacterial cell surface binding GO:0048666 neuron development GO:0030424 axon GO:0070593 dendrite self-avoidance GO:0043025 neuronal cell body GO:0030425 dendrite GO:0005515 protein binding GO:0021551 central nervous system morphogenesis GO:0048846 axon extension involved in axon guidance GO:0042803 protein homodimerization activity |
InterPro families    | IPR008957 Fibronectin type III domain IPR003598 Immunoglobulin subtype 2 IPR003961 Fibronectin, type III IPR013098 Immunoglobulin I-set IPR013783 Immunoglobulin-like fold IPR007110 Immunoglobulin-like |
Orthology group | MCL10049 |
Nucleotide sequence:
ATGTTGTCCCCACGTACATTATCACATGAGACGTCTCGATCGCCTCCACGGGCCATTCAT
GAGTTCTGGGTGTCCGCCTCCACCAGACTCGGAGAAGGTGATTCTACGAGGGTTGTCAAA
GTACTGCCGTCAGACACCGTTCCAGCAAGAATTACTTCATTTAGTCGAAGTATCGTCACA
CCCTGGAAGGAAAATATATCTTTGGCTTGCAACAAAGTTGGTGTTCCAATACCATCGACA
ACATGGAGAATGAATGGTGCAATTCTAGAATCGACCTTGAGAAAAAATGTTACCAGTGAT
GGCACATTGATAATTAGCATGACACAATACGCTGACAGCGGAAATTACACGTGCCTAGTT
GAAAATACTCATGGTCGTGACGAGGTGACTTACGGTGTCGAAGTGAAGGTCCCTCCTCAA
CCGCCCGTGTTAGCTGTGGTCGACTCGTACGCTGATTCACTACACTTACAATGGAGTGAT
CAGGGGGACGGTGGCAGCCCTATTTTAGGATACGTTATAAACTACAAACGGGAGCACGGG
GACTGGGAGGAGCTTCAAGTGGAGGCGGGTACATCTGAGCACGTGCTGCCAAACCTTTGG
TGCGGAACCAGATACCAGCTATATATCACTGCCTTCAACCGCATCGGTACTGGCCTACCA
TGCGATATCGTGCATGCATATACCAAGGGCACCGTGCCTGTGAAACCGAAGCACTCCCAG
ATGATAACTCTCAACACGACAACTGTGACGGTGTGGCTCGACTCGTGGGGCGACGGAGGC
TGCGGGATATTGTACTTCGTTATAGAGTACCGGGAGATAAGTCAGTCGCAGTGGAGATTA
GTCTCGAACAGTGTGCAAGCAACAGAAAGAGTATTCAGTGTAACAGGACTGTCACCCGCC
ACGCACTACCAGCTACGGATCACAGCCCATAACAACGCGGGTCACGCTTTAGCACTTTAT
AATTTTACTACACATTCGTTGAGTGGAATGTTGGACGGTGAGGTGTCCCCGGCAGTGCCG
GCGGCTGGTCCACGTTCTCTGGGTGGTGTACGTGTTTTGCTGCCGGCGGCGCTATCCCTG
CTGGTGCTGGCCGCCCTTGTAGCCATAGTCTTATTAATTAGAAGGAACAAAGCAGGCCCA
ATAGAGACAACTGCACCTGAGACAGGAGTGGGCGAGTCACCGTCCGTGGCCCAGCTGCAG
AACAAAGTGAATCGCGACCAGCAATACCTCGCCACCCGCGCCCAGCACCCACCACCACAG
CACCATTACAAACACGCTTCAAATGAATACATCGAAGACATCTGCCCCTACGCTACTTTC
CAACTGACCAAACCGAGCGCTTACAGCGAGAGCAGCTATAGCGGCAACGTATACAGCGGC
CCCTACCACTCCGTGAGAGGATCCTTCGTATATCACGATCTCAAGCAAAATGATAAATAC
AAAGGAAAAGAACCAGAGTATACGAAAGTACGACGAAAAGGAAACAGACTGCGAGATCCT
CACTCTGAAAGCCAAGAGTCGGACAACTTGGGATCAACGGACTCAGAGGTGAAGAAGATA
CTAACGCTGCACCTGCCAATTACAGAGTACGAGGACGACGCCAGCGACGACGCCAGCGCG
CTGCATTCTGACAGCGAGCCCGGGGCGAGGCTACGGCCTACGCACCCCACCGCTTACCCC
AGCGTCGAGCGAGAGGAGTCGTCATCGTCCTCGGAGAATTCGATGGGCGGAGTGGTGCGA
AAGGCATTTCCCTCGCGCAAGGGCAAGGCTGGCGTCGGCAAGAGACACGTGCGCTCTTCC
AGCGGATACAGCAGCCACAACGATGAGACAACCTTCAGTATATCGAACTACCCGTCGTTC
AACGAGCACATCCACCCACCGTCGCGGTTTTCAGACGACACCGACTGCGGCCGCAAACGC
GTCCACGCACACGCAGACAAGATGACACGAGAAGCCTTCCAGATTAACGTCTGA
Protein sequence:
MLSPRTLSHETSRSPPRAIHEFWVSASTRLGEGDSTRVVKVLPSDTVPARITSFSRSIVT
PWKENISLACNKVGVPIPSTTWRMNGAILESTLRKNVTSDGTLIISMTQYADSGNYTCLV
ENTHGRDEVTYGVEVKVPPQPPVLAVVDSYADSLHLQWSDQGDGGSPILGYVINYKREHG
DWEELQVEAGTSEHVLPNLWCGTRYQLYITAFNRIGTGLPCDIVHAYTKGTVPVKPKHSQ
MITLNTTTVTVWLDSWGDGGCGILYFVIEYREISQSQWRLVSNSVQATERVFSVTGLSPA
THYQLRITAHNNAGHALALYNFTTHSLSGMLDGEVSPAVPAAGPRSLGGVRVLLPAALSL
LVLAALVAIVLLIRRNKAGPIETTAPETGVGESPSVAQLQNKVNRDQQYLATRAQHPPPQ
HHYKHASNEYIEDICPYATFQLTKPSAYSESSYSGNVYSGPYHSVRGSFVYHDLKQNDKY
KGKEPEYTKVRRKGNRLRDPHSESQESDNLGSTDSEVKKILTLHLPITEYEDDASDDASA
LHSDSEPGARLRPTHPTAYPSVEREESSSSSENSMGGVVRKAFPSRKGKAGVGKRHVRSS
SGYSSHNDETTFSISNYPSFNEHIHPPSRFSDDTDCGRKRVHAHADKMTREAFQINV