| New model in OGS2.0 | DPOGS202493 |
|---|---|
| Genomic Position | scaffold1426:+ 24835-32620 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 986 |
| Single RNAseq reads | 4763 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000097 (5e-160) |
| Best Drosophila hit | Calpain-A, isoform C (7e-86) |
| Best Human hit | calpain-9 isoform 2 (5e-51) |
| Best NR hit (blastp) | PREDICTED: similar to calpain B [Acyrthosiphon pisum] (1e-96) |
| Best NR hit (blastx) | PREDICTED: similar to calpain B [Acyrthosiphon pisum] (8e-101) |
| GeneOntology terms | GO:0004198 calcium-dependent cysteine-type endopeptidase activity GO:0030036 actin cytoskeleton organization GO:0005737 cytoplasm GO:0006508 proteolysis GO:0005509 calcium ion binding GO:0005622 intracellular GO:0016540 protein autoprocessing GO:0006911 phagocytosis, engulfment GO:0009953 dorsal/ventral pattern formation GO:0021919 BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0042335 cuticle development |
| InterPro families | IPR022682 Peptidase C2, calpain, large subunit, domain III IPR022683 Peptidase C2, calpain, domain III IPR002048 Calcium-binding EF-hand IPR022684 Peptidase C2, calpain family IPR011992 EF-hand-like domain IPR018249 EF-HAND 2 |
| Orthology group | MCL10179 |
Nucleotide sequence:
ATGATTCAATCATTCAAGGACTTCACCAGCAACTTTGATAGAGTCGAAATCTGCAACTTG
AACCCCGACTCCCTGGACCCCGAAGAATGTCCTGAGGGCTGCACCAAGAAGTGGGAGATG
TCTGTGTTTGAAGGGGAGTGGGTCAGAGGTGTAACCGCTGGCGGCTGTAGGAATTACCTA
GAATCGTTTTGGAAGAATCCTCAATACACCGTTACACTGAAAGACCCCGACGAAGATGAC
GCGGAGAACAAGTGTACCATAATAGTGGCGTTGATGCAAAAGAACCGTCGCTCTCAGCGT
CACCAGGGGCTCGAGTGCCTCACCATAGGGTTCGCGGTGTACCGCCTGCCCGACTACGGC
CATGTGCCCAAGCCCTTAGATGTCAACTTCTTCAAATACAACGCCAGTGTGGGCAGGTCG
CAGGCCTTCATCAATCTGAGGGAGGTCAGCGCCAGATTCAAATTCGAGCCCGGAAGCTAC
GTCATAGTGCCGTCCACCTTCGAACCTGACGAGGAAGGGGAGTTCCTGTTGCGTGTGTTC
TCCGAGAAAACGAATAATATGACAGAGAACGACGAAGAAGTAGGGATGGGAGACGTGGAT
GACAGAAAAATGTTAGATTATGTCATTACGGCGGTCAAACGGACGCTGGGAAGACACGCA
GGGGACCTGGCATTCCGTGGAATTTATCGCTATAAGAATGGACAAAATGGCCATCATGAC
CAAAACGCGGATGGGATTGTTAGAACTAGAGTGAAGGAAATAACTCCCAACCCGGAGCCC
GCGGATCCTGTTAGAGAGTTCTTCACCCGCCTGGCTGGGAGCGACGGGGAGGTGGACTGG
CAGGAACTGAAGGAGATACTGGACTACGCCATGAGAGAGGACCTAATGCCGCTTTGTAAT
TGTCCGCCAAACGAACCGATGACATCTAAATGGCTATGCGGCATGGCGCTTATGACGGGG
GCGGGGGATCCCCGCCCGATCTGCAAGGAGATAGGAATAGACCTACAGCAGATGCAAACA
CAGCCGGAGCAGGTCCACCTCAACCAGCCGCAGGCGCAAGAACTAAAAGGACAAGGTTTC
TCTAAGGAAGTCTGTAGGAGTATGGTTGCTATGTTGGACAAAGACAACTCTGGCGGACTC
GGCTTCGAAGAGTTCAAATCTCTTTGGATCGATTTGCGCAACTGGAGGGTAGGGGGCGGG
GGATCCCCGCCGAACGAACAGAGCTGTTTGGAACAGCTGCTTTGCGCGCTCTGCACGCCG
ATCTGCAAGGAGATAGGAATAGACCTACAGCAGATGCAAACACAGCCGGAGCAGGTCCAC
CTCAACCAGCCGCAGGCGCAAGAACTAAAAGGACAAGGTTTCTCTAAGGAAGTCTGTAGG
AGTATGGTTGCTATGTTGGACAAAGACAACTCTGGCGGACTCGGCTTCGAAGAGTTCAAA
TCTCTTTGGATCGATTTGCGCAACTGGAGGGTAGGTGACACGCTATACGGGTCAAGCGAT
GGCTACATACAGTTTGATGACTTCATCATGTGTTCGGTGCGGCTGAAGACCATGATCGAC
GCTTTCCAAGGCAGGTCGTCGGGCGGCGACTACGCCACGTTTTCCCTGGACGAATGGCTG
AATCGCACAGTCTACTCCTAA
Protein sequence:
MIQSFKDFTSNFDRVEICNLNPDSLDPEECPEGCTKKWEMSVFEGEWVRGVTAGGCRNYL
ESFWKNPQYTVTLKDPDEDDAENKCTIIVALMQKNRRSQRHQGLECLTIGFAVYRLPDYG
HVPKPLDVNFFKYNASVGRSQAFINLREVSARFKFEPGSYVIVPSTFEPDEEGEFLLRVF
SEKTNNMTENDEEVGMGDVDDRKMLDYVITAVKRTLGRHAGDLAFRGIYRYKNGQNGHHD
QNADGIVRTRVKEITPNPEPADPVREFFTRLAGSDGEVDWQELKEILDYAMREDLMPLCN
CPPNEPMTSKWLCGMALMTGAGDPRPICKEIGIDLQQMQTQPEQVHLNQPQAQELKGQGF
SKEVCRSMVAMLDKDNSGGLGFEEFKSLWIDLRNWRVGGGGSPPNEQSCLEQLLCALCTP
ICKEIGIDLQQMQTQPEQVHLNQPQAQELKGQGFSKEVCRSMVAMLDKDNSGGLGFEEFK
SLWIDLRNWRVGDTLYGSSDGYIQFDDFIMCSVRLKTMIDAFQGRSSGGDYATFSLDEWL
NRTVYS