| New model in OGS2.0 | DPOGS206474 |
|---|---|
| Genomic Position | scaffold901:+ 11955-19940 |
| See gene structure | |
| CDS Length | 2712 |
| Paired RNAseq reads | 3271 |
| Single RNAseq reads | 7898 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005426 (2e-121) |
| Best Drosophila hit | chromator, isoform A (2e-38) |
| Best Human hit | chromobox protein homolog 5 (1e-06) |
| Best NR hit (blastp) | hypothetical protein Phum_PHUM169860 [Pediculus humanus corporis] (1e-83) |
| Best NR hit (blastx) | PREDICTED: similar to Chromator CG10712-PA, isoform A [Apis mellifera] (4e-80) |
| GeneOntology terms | GO:0006325 chromatin organization GO:0005705 polytene chromosome interband GO:0000785 chromatin GO:0003682 chromatin binding GO:0005634 nucleus GO:0006333 chromatin assembly or disassembly GO:0005819 spindle GO:0005813 centrosome GO:0051276 chromosome organization GO:0005700 polytene chromosome GO:0007059 chromosome segregation GO:0007052 mitotic spindle organization GO:0051310 metaphase plate congression GO:0000090 mitotic anaphase GO:0007094 mitotic cell cycle spindle assembly checkpoint |
| InterPro families | IPR000953 Chromo domain IPR016197 Chromo domain-like |
| Orthology group | MCL12985 |
Nucleotide sequence:
ATGACTACCGTGGAAGAAGGAGAATCGCCTACGGAAGATATACCAGTGGGAAATCCAGAA
GAATTAACGAAAAATCCTACGGCTCTTAAAGAGGCACATGAAGAAATGGCCACATTGGAT
GTTCTTGTGTGTGGACAATGTCATTCAGCATTCCATTTTGTTGAAGAATTTAAAGAACAT
AAGGATGCTAATAATTGTACTGGTAAATCGCCAAATGAAAGTAAAGCTCAAGTATGGGCA
TTCCTTTTGTGGAAGTGTTCATCAGTCCGTGATGGGTCAACATCGAATGCCGACAACAGT
TGGAAGCTTTACCAGCAGTGGTGTAGAATGCCGGAGGCTCAGAGAACTGCTTGGATAACA
GCTGGATCTAATGTTCAGGCTTTATCTAAGTTTGCGCATGCTAAAGTTATGGAACTTAAA
ACAGAAGACCAGTTGGTTCCTGTCCAACAATCAGCTCCTGAATTAGTTAAGAAACCTCGA
GGAAGGCCAAGAAAAGTTACTAAGCTGGATGAGGAGACCCAACCGTCCGGGGAGGAGAGT
GATGATTTTAAGGGAAGTCCAGGGCCAAAGGCCCTTCTCAATAAACTAGCTCAGGCTAAC
AAATCTAGGGATATGTCGAACGAGTCTGTTCGTGGGGCACAAGAGCGTGTTCCACCCGAG
GAACGTATAGCGCGACGATCAGAACGAGAAGGTACCGCTGAAGGGGAGTATGTCGTGGAG
AAAATACTTGCCAAGAGATTTAACCCTAGACGGAAGCATTATGAGTATCTGCTCAAGTGG
GAGGGGTATCCACATGAACAGAATACATGGGAACCAGTGGAAAATATGGAAACTTGTAAA
CATCTCTTAGAGGCGTTCGAAAAACAATTAGCAAGGCAGAAAGAACTTAAAGCATTAAGG
GCACAACAACAACAACACCCGGTCCAGGTGAAGCAAATAAACACTCCCATGCCGCAAGTG
GTTAAACAAATGGTGAAAAAGTCTGATAGCCCCATATTAACTCCCACTGGTCGCCTGCAA
CGTACCAGCAAAGCCCGTGCTCTTGACCAAGTGAAGGCTTGGTGCGGTGCGGATGACGAG
CCAGCCTCAAAGAAGATCAAACGTGAACTGTCCAGTGACGATGACTACTCCGATACAGAT
TCCATGAAAGCTGAGAAGAAGATACTTAATGGGCAGTCTTCGCCAAAGTCAAACATAGAC
CCTGAGCTGGTGAAGTCTCTGGGTCTGGGCGGCAAAGGCATGCCCAACATTAAAGGCGTC
ATCAAAGTTGACCCTAAACACATGCCTAATCTCACTACTGGTGTCTACATAATGTCGAAA
AGTTCTGGTATAATGAAAATAGACTCTCCAGGGAAACTAGGACCCGGTTTGAATATTGAT
CAAGATGTCATTAGGAAACAGATAATGGCTGCCAAACAGAAGAAAATGGAAGAATCTAAA
AAGTCGCCGCTAAGTTCATCACAGTCACAGATTAAGAAAACATATAGTTCTGGAGGACAG
CAAGTAACAGAAAAGACAATAATCACACCTTCTGGACAGAAGATTATACAAAGAACAATA
CAGAGACCATATGGACAGTCTGATGGGAAATCCCCTGTTGCAATTCTTAATAAAAAATTA
GCTCAAGGTGATAGTCTACTGCGCGGTTCTGGACGCGGAGGTATGACACGTGGTCGACCA
CGCGGCGGGCATAGTGTAGCGACGGCCGCTGGAAACATCGTGCGCATCCGGGAGAAACCT
GTCAACGTCAACTTTGAGTGGGAGGCGTCATCAGAGTCATCCGATGGTATTGAAGATCCG
TTCCCTACTGACCTCGGTCCCATACCATCGCCCAGTCCTGAGCGTGAACTGACACTATGT
CCGCTAACAGGAAGGAGGCTGGCGAGGGCGGAAGGGGAGCCCACCCCGCCGCCGACGCCG
CCACCGCAGCCCGCCACGCCACCGCCCGAACATCACGCTACTATGCTCATGAAGGTAGAA
ATGTCGCCGGGTGGTACTACGGGAATGTTGGTCCAAGGAGATGGAGCTCAACCTTCATTG
CCAGTTTTAACGGATGAGGATGGTACGGAAGTGAAAGTAGAAGCGAGTGCTGTGAAACAG
TTGTTAGAAGAAGCGGTCGGTGTTGACGACGGAGAGGAGGTCGGGCTGGCGTTGCACGCG
GGACACACTCCCATCATGATACGAGGGGAGGATGGCGTGTTATACCAGGTGGCTGGAGAA
AATGAAGCCGGTCAAACGTTACTAGTAGCGGCAGAAGGTGTCGAAGGAGCCGTTGAGGGA
GTCGAGGGAGCTGATTGTGATGGAGAAGGAGTCATGTACGTCACGAGAGAAGACGGACAG
ACGTTACTCGTAGCAACACAAGGTGTGGATGGTACAGTGCAAGGTGTTGAAGGTGCTGAA
GGGGAAGCGGAAGGAGTCACATATGTTACTAGGGAAGATGGACAGGATGTGTTGACAATC
GATCCGACGCAGTTAGCGCAGTTGATGCCGGGCGGCGAGGCGGGCGGGTTGCAGCAGGTC
GCCGTGCAGGTTGAAGGCGAGCCTGGTGAAGACGCCACGCAGGTCATAGCACAGCTAGTA
CAGGCAGACCTGCCCTCACCAGGTGGCACTCGGCGCGTCGTCCTTTTATTACCGGACGGC
AGTTTTACTATGACAGAACTAGATAAAGAACAATACGAGTCAATAACTGAAGGCGCCAAG
GCCCAAGAGTGA
Protein sequence:
MTTVEEGESPTEDIPVGNPEELTKNPTALKEAHEEMATLDVLVCGQCHSAFHFVEEFKEH
KDANNCTGKSPNESKAQVWAFLLWKCSSVRDGSTSNADNSWKLYQQWCRMPEAQRTAWIT
AGSNVQALSKFAHAKVMELKTEDQLVPVQQSAPELVKKPRGRPRKVTKLDEETQPSGEES
DDFKGSPGPKALLNKLAQANKSRDMSNESVRGAQERVPPEERIARRSEREGTAEGEYVVE
KILAKRFNPRRKHYEYLLKWEGYPHEQNTWEPVENMETCKHLLEAFEKQLARQKELKALR
AQQQQHPVQVKQINTPMPQVVKQMVKKSDSPILTPTGRLQRTSKARALDQVKAWCGADDE
PASKKIKRELSSDDDYSDTDSMKAEKKILNGQSSPKSNIDPELVKSLGLGGKGMPNIKGV
IKVDPKHMPNLTTGVYIMSKSSGIMKIDSPGKLGPGLNIDQDVIRKQIMAAKQKKMEESK
KSPLSSSQSQIKKTYSSGGQQVTEKTIITPSGQKIIQRTIQRPYGQSDGKSPVAILNKKL
AQGDSLLRGSGRGGMTRGRPRGGHSVATAAGNIVRIREKPVNVNFEWEASSESSDGIEDP
FPTDLGPIPSPSPERELTLCPLTGRRLARAEGEPTPPPTPPPQPATPPPEHHATMLMKVE
MSPGGTTGMLVQGDGAQPSLPVLTDEDGTEVKVEASAVKQLLEEAVGVDDGEEVGLALHA
GHTPIMIRGEDGVLYQVAGENEAGQTLLVAAEGVEGAVEGVEGADCDGEGVMYVTREDGQ
TLLVATQGVDGTVQGVEGAEGEAEGVTYVTREDGQDVLTIDPTQLAQLMPGGEAGGLQQV
AVQVEGEPGEDATQVIAQLVQADLPSPGGTRRVVLLLPDGSFTMTELDKEQYESITEGAK
AQE