| New model in OGS2.0 | DPOGS215986 |
|---|---|
| Genomic Position | scaffold343:+ 55085-57579 |
| See gene structure | |
| CDS Length | 945 |
| Paired RNAseq reads | 415 |
| Single RNAseq reads | 1274 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000931 (3e-151) |
| Best Drosophila hit | Pop2, isoform A (4e-121) |
| Best Human hit | CCR4-NOT transcription complex subunit 7 isoform 1 (5e-104) |
| Best NR hit (blastp) | GI13677 [Drosophila mojavensis] (2e-133) |
| Best NR hit (blastx) | GL17886 [Drosophila persimilis] (9e-132) |
| GeneOntology terms | GO:0005634 nucleus GO:0016251 general RNA polymerase II transcription factor activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0003676 nucleic acid binding GO:0005737 cytoplasm GO:0048666 neuron development GO:0007517 muscle organ development GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening |
| InterPro families | IPR006941 Ribonuclease CAF1 IPR012337 Ribonuclease H-like |
| Orthology group | MCL14443 |
Nucleotide sequence:
ATGGCATGTGTTGAGTTGACCACGGCGTCTCTAAAACCAGAAGAGTCGAAACGTTCTGAA
ACAGACAGTCGGTTCAAGATGCCTGCAGCAAGCTTTGGTTCTCTTTCATTACCTGGAACT
GGTGACTGTGGAATTAAAGATGTCTGGAATCACAACCTTCATGAAGAGTTTGCAATAATT
AGACAAGTTGTTCAAAAGTATCATTGGGTTGCAATGGACACTGAGTTTCCTGGAGTAGTA
GCCAGACCTATTGGGGAGTTTCGCTCTACTGCTGACTACCAATACCAACTTCTCAGGTGC
AATGTTGATTTACTGAGGATAATTCAATTGGGTCTTACATTCATGGATGAAAATGGAAAA
ACACCCCCAGGTTATACAACATGGCAGTTCAATTTCAAATTTAACCTACAAGAAGACATG
TACGCACAAGACTCCATTGATTTATTGCAAAATTCTGGATTACAATTTCGTAAACATGAA
GAAGACGGTATTGAACCTTTAGAATTTGCCGAACTTCTTATGTCATCAGGTCTAGTGTTA
ATTGACAACATAAAGTGGTTAAGCTTTCACTCGGGATATGACTTTGGATATCTTCTGAAG
TTGTTAACAGATCAAAATTTACCACAGGATGAAAATGTGTTCTTTGAAAATCTTCGACTC
TATTTCCCAACGGTGTATGATGTCAAGTACCTGATGAAGTTGTGCAAAAATCTTAAAGGT
GGACTTCAAGAAGTAGCAGATCAGTTGGAACTGAGACGAGTGGGACCCCAACATCAGGCT
GGTTCAGACTCACATCTGACTGGGATGGCTTTCTTCAAAATCAAAGAGATATTCTTTGAT
GATAATATTGAAAGTTCAAGTGGTCACCTCTATGGTTTAGGAGCACCATTCTCAGTGAAT
GCAAATAACTTTCAAGACAATGGTGAAAATGGGAATTCATCTTGA
Protein sequence:
MACVELTTASLKPEESKRSETDSRFKMPAASFGSLSLPGTGDCGIKDVWNHNLHEEFAII
RQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGK
TPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEPLEFAELLMSSGLVL
IDNIKWLSFHSGYDFGYLLKLLTDQNLPQDENVFFENLRLYFPTVYDVKYLMKLCKNLKG
GLQEVADQLELRRVGPQHQAGSDSHLTGMAFFKIKEIFFDDNIESSSGHLYGLGAPFSVN
ANNFQDNGENGNSS