| New model in OGS2.0 | DPOGS201525 |
|---|---|
| Genomic Position | scaffold7726:+ 3904-6476 |
| See gene structure | |
| CDS Length | 582 |
| Paired RNAseq reads | 94 |
| Single RNAseq reads | 330 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002704 (6e-61) |
| Best Drosophila hit | neural lazarillo (6e-31) |
| Best Human hit | apolipoprotein D precursor (3e-31) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000012317 [Nasonia vitripennis] (7e-54) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000012317 [Nasonia vitripennis] (6e-54) |
| GeneOntology terms | GO:0005576 extracellular region GO:0005615 extracellular space GO:0008289 lipid binding GO:0005319 lipid transporter activity GO:0005515 protein binding GO:0006629 lipid metabolic process GO:0005215 transporter activity GO:0005501 retinoid binding |
| InterPro families | IPR022271 Lipocalin, ApoD type IPR011038 Calycin-like IPR000566 Lipocalin/cytosolic fatty-acid binding protein IPR022272 Lipocalin conserved site IPR002969 Apolipoprotein D IPR012674 Calycin |
| Orthology group | MCL10602 |
Nucleotide sequence:
ATGTCCGTGATCCGCGCGATAGCTGTGTTCTTGTGCGGGTTGTCTTGGACAGTTTGCAAG
GCACAGATTTTGTTCCCAGGAGCATGCCCTGATGTGGCCGCGATGAGCGACTTTGATCCC
AGCCGTTATTTGGGGAAATGGTACGAAGCTGAAAAATACTTCGCAGCATTTGAGCTCGGT
GGTGCCTGCATCACCGCCAATTACAAACTAAAGGATAATGGCGCCATCAGTGTTGTCAAC
GAGCAGTTCAGCTTATTAACCGGCACGAAAAAGTCTATAACCGGTGAAGCTGTTCAAGTC
AGTCGCTCGGAGCCAGCCAAGCTATCAGTGACCTTCTCTTCTCTGCCGGTCAACATACCG
GCCCCCTACTGGATCGTGAGCACAGACTATGACTCCTACGCTCTAATATGGAGCTGCTAC
GACTTTGGGATATTTCATACAAGAAATGCTTGGATCCTGACTAGACAAAGAAAGCCTTCA
GCATCGGTTTTGGACGAGGCCTACTCGGCCGCTGACAAGAACAACATCAACAGGTCCTAC
TTCATGAGGACGGATCAAACAAACTGCTCCGAGGATTCTTAA
Protein sequence:
MSVIRAIAVFLCGLSWTVCKAQILFPGACPDVAAMSDFDPSRYLGKWYEAEKYFAAFELG
GACITANYKLKDNGAISVVNEQFSLLTGTKKSITGEAVQVSRSEPAKLSVTFSSLPVNIP
APYWIVSTDYDSYALIWSCYDFGIFHTRNAWILTRQRKPSASVLDEAYSAADKNNINRSY
FMRTDQTNCSEDS