| New model in OGS2.0 | DPOGS214479 |
|---|---|
| Genomic Position | scaffold821:- 36067-37443 |
| See gene structure | |
| CDS Length | 1248 |
| Paired RNAseq reads | 60165 |
| Single RNAseq reads | 189435 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013413 (0.0) |
| Best Drosophila hit | alpha-Tubulin at 84B (0.0) |
| Best Human hit | tubulin alpha-3C/D chain (0.0) |
| Best NR hit (blastp) | GL12416 [Drosophila persimilis] (0.0) |
| Best NR hit (blastx) | alpha-tubulin [Xestia c-nigrum] (0.0) |
| GeneOntology terms | GO:0045298 tubulin complex GO:0005874 microtubule GO:0005525 GTP binding GO:0005200 structural constituent of cytoskeleton GO:0005198 structural molecule activity GO:0051258 protein polymerization GO:0007018 microtubule-based movement GO:0003924 GTPase activity GO:0007094 mitotic cell cycle spindle assembly checkpoint GO:0009987 cellular process GO:0005819 spindle GO:0019730 antimicrobial humoral response GO:0007052 mitotic spindle organization |
| InterPro families | IPR002452 Alpha tubulin IPR000217 Tubulin IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR023123 Tubulin, C-terminal IPR008280 Tubulin/FtsZ, C-terminal IPR017975 Tubulin, conserved site |
| Orthology group | MCL10041 |
Nucleotide sequence:
ATGCCCACTGACAAAACCATCGGTGGCGGCGACGACTCCTTCAACACCTTCTTCAGCGAG
ACCGGAGCCGGCAAACACGTGCCCCGTGCCGTGTTTGTTGACTTGGAACCTACCGTAGTC
GATGAGGTCCGCACTGGCACATACAGACAGTTGTTTCATCCAGAACAACTTATCACTGGT
AAGGAAGACGCGGCCAACAACTACGCCCGTGGTCACTACACCATCGGAAAGGAAATCGTA
GACTTGGTACTCGACCGCATCCGCAAATTGGCCGACCAATGCACGGGTCTGCAGGGCTTC
CTCATCTTCCACTCGTTCGGAGGCGGCACCGGCTCAGGGTTCACCTCCCTGCTTATGGAG
CGCCTCTCCGTGGACTACGGCAAGAAGTCCAAGCTCGAGTTCGCCATCTACCCCGCGCCT
CAGGTGTCCACCGCCGTCGTCGAGCCCTACAACTCCATCCTGACCACCCACACCACCCTG
GAACACTCCGACTGCGCCTTCATGGTCGACAACGAAGCCATCTACGATATCTGCCGCAGG
AACTTGGACATCGAGCGCCCGACTTACACCAACCTCAACAGGCTGATCGGTCAGATCGTG
TCCTCCATCACGGCCTCCCTGCGTTTCGACGGCGCCCTCAACGTCGACCTAACCGAGTTC
CAGACCAACTTGGTGCCCTACCCACGTATCCACTTCCCTCTGGTGACATACGCGCCCGTC
ATCTCCGCGGAGAAGGCTTACCATGAACAGCTCTCCGTGTCCGAAATCACAAACGCTTGC
TTCGAGCCCGCCAACCAGATGGTGAAATGCGACCCGCGCCACGGCAAGTACATGGCGTGC
TGCATGTTGTACCGAGGAGACGTCGTCCCTAAGGACGTGAACGCGGCCATCGCCACCATC
AAGACCAAGCGCACCATCCAGTTCGTGGACTGGTGTCCCACCGGGTTCAAGGTCGGCATC
AACTACCAGCCCCCGACCGTAGTCCCCGGCGGTGATCTCGCCAAGGTCCAGCGCGCCGTC
TGCATGTTGTCCAACACCACCGCCATCGCCGAGGCCTGGGCCCGTCTGGACCACAAGTTC
GATCTGATGTACGCCAAGCGCGCCTTCGTCCACTGGTACGTCGGTGAGGGTATGGAGGAG
GGAGAGTTCTCCGAGGCCCGCGAGGACTTGGCCGCTCTGGAGAAGGACTACGAGGAAGTC
GGCATGGACTCCGCCGAGGGTGAAGGAGAAGGAGCCGAGGAATACTGA
Protein sequence:
MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV
ISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSAEGEGEGAEEY