| New model in OGS2.0 | DPOGS211032 |
|---|---|
| Genomic Position | scaffold11121:+ 1687-3597 |
| See gene structure | |
| CDS Length | 471 |
| Paired RNAseq reads | 930 |
| Single RNAseq reads | 2508 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011308 (3e-72) |
| Best Drosophila hit | CG3902 (3e-52) |
| Best Human hit | short/branched chain specific acyl-CoA dehydrogenase, mitochondrial precursor (4e-39) |
| Best NR hit (blastp) | acyl-coenzyme A dehydrogenase [Bombyx mori] (9e-74) |
| Best NR hit (blastx) | acyl-coenzyme A dehydrogenase [Bombyx mori] (2e-70) |
| GeneOntology terms | GO:0016937 short-branched-chain-acyl-CoA dehydrogenase activity GO:0050660 FAD binding GO:0055114 oxidation reduction |
| InterPro families | IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR006092 Acyl-CoA dehydrogenase, N-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR006089 Acyl-CoA dehydrogenase, conserved site |
| Orthology group | MCL12298 |
Nucleotide sequence:
ATGGAAGACGAACACAAAATTGACGAAACCGTCAGACAAATGCTCTTCGATAATGGGTTA
ATGGGCATTGAGACGCCAGTGGAGTACAGCGGGTCGGGTTGCGGGTTCCTGACCATGATG
TTGGTTGTTGAGGAACTGTCGAGGGTGGATCCAGCTGTCGCAGCGTACGTCGACATTCAC
AACACACTCGTAAATTCGCTATTCATGAAATTGGGCACCGAAGAACAGAAGAAGAAATAT
TTGACTAACCTCTGCACCAAATACGCTGGCAGTTTTTGTCTGACGGAACCTACATCGGGT
TCTGATGCCTTCTCCCTTAAAACCGTTGCAAAGAAGGACGGCAAGGATTACGTCATTAAT
GGATCCAAAATGTGGATATCAAATTCCGATGTCGCCGGAGTATTTCTGGTCATGGCGAAC
GCTGATCCCTCAAAAGTATGTAATTTTATAATATCGTCTATTGATAACTAA
Protein sequence:
MEDEHKIDETVRQMLFDNGLMGIETPVEYSGSGCGFLTMMLVVEELSRVDPAVAAYVDIH
NTLVNSLFMKLGTEEQKKKYLTNLCTKYAGSFCLTEPTSGSDAFSLKTVAKKDGKDYVIN
GSKMWISNSDVAGVFLVMANADPSKVCNFIISSIDN