| New model in OGS2.0 | DPOGS207383 |
|---|---|
| Genomic Position | scaffold604:+ 25366-30104 |
| See gene structure | |
| CDS Length | 1989 |
| Paired RNAseq reads | 399 |
| Single RNAseq reads | 918 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008880 (7e-10) |
| Best Drosophila hit | Actin-related protein 5 (2e-118) |
| Best Human hit | actin-related protein 5 (5e-74) |
| Best NR hit (blastp) | PREDICTED: similar to CG7940-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG7940-PA [Apis mellifera] (4e-175) |
| GeneOntology terms | GO:0006338 chromatin remodeling GO:0016585 chromatin remodeling complex GO:0030528 transcription regulator activity GO:0045449 regulation of transcription |
| InterPro families | IPR004000 Actin-like |
| Orthology group | MCL14338 |
Nucleotide sequence:
ATGGACGACGTTCTCGTACTTAAGGATTATAAAACTATTCCTGATATAGTTCATGAATAT
GCTCCATCTTTAAAGTTCGGTCATATACCATTAGTTATTGACAATGGTTCATATCAGTGT
AGGGTGGGTTGGTCAATATACGACGAGCCGTATTTAACATTTAAAAATCTGATAGCTAGG
CCTCGTAAAGACCGCTGTAAAAAAGACGCTGATCCTCCGGTAACACCTCCTATACAAATT
GGAAATGATATAGTTAATATAGAAGCTGTAAGGTTTCAGCTGAAAACACAGTTTGATAAA
AATATAGTCACCCACTTTGAAGTTCAAGAGCAAGTCTGTGATTATATCTTTTCCCACCTC
GGTATTGACAGTGAAGGTCATGTTCCACATCCTATTGTTATGACGGAAGCATTTGTTACT
CCCAACTACAGCCGACAGTTGATGTCAGAATTGCTTTTTGAGGCTTATGGTATACCAGCA
GTGAGCTATGGAGTGGATTCGCTGTTTAGTTTCTACAGAAATGGTATCGGGGACACAGCA
TTAATAGTTAACTGTGGCTATCACACTATTCACTTTATACCCGTGTTAAAAGGAAAAGTT
GTTGCCGAGCGCGCTAGAAGAATTAACTTAGGTGGAAGTGAAATTATATCATATATGCAC
AAACTCCTGCAACTTAAGTACCCTGTTCATGTAAATGCCATAACAATGTCCAGGATTGAA
GAGATTCTTCACGAACACTGTTCAATAGCCTTGGACTATCAGGAGGAAATAAGGAAATGG
GCAAACCCAGATTACTATGAAGCTAATGTTAAAAGAGTCCAATTGCCATTTGTACAATCA
TCAAGTTCATCGACCTTAACAGCCGAGCAACAAAAAGAAAGAAAGAAGGAAATGGCGCGC
CGTTTGCTTGAAATAAATGCTAGAAAGAGGGAAGAACGGCTCTTAGAGGATGAAGAACAG
CTGAACCAGCTCTTGGCTTTGCAGGAATTGATTGAAGATGGTGAAACTGATGAGTTTAAT
GAAGCGATCAAAGCATTTGATATAAAGAATTATGGTGATCTGCAGAGACAAATAGCAAAT
TTGAATGTGAGGATTGAGAAGAACAAACAACGTATTGCTGCAGCGGCAAATGCTGAGGAA
GTGGTGGAGACCAGACCGGCTGGGCGGTACCAGCCACCCAATGATCCAGAAGCGTTCCAA
GTGTGGTTAGAGGAAACCAGGGCTAAATACCGTGAAGTGTCAGCTCGTCGAGAGGCCCGC
AGGGCGCGTCGCGCGGCGATGGCTAAGAGACGCACAGCCGCCGCCGCTGAACGTATGAGA
GCTATCTCTAGACTCGCGGCCGCGGGCGACGACTTCGGTTATAGGGATTCAGATTGGGAC
GTCTATAAAAGTATAAGCCGTGAAGCCGACTCTGATTCAGAGGCGGACGGCGAAAGGTTG
GTGGAGTTGGAGGAAGCGCTGAGGGAATACGAACCAGCGCAGCCCTCACAGTACCATCAC
CAACTACATCTCGCCATAGAACCCATCAGAGCTCCAGAATTGATGTTCCAACCGTCAATG
ATGGGAAACTTAGAGGCTGGATTGGCTGAAACAATGGAATACGTATTCAAACATTTCAGT
GAAGAAGACCAGCTGCTATTAGCTAACAACGTGTTCCTCACCGGGGGATGTTCACAATTT
CCAGGTTTAAAGGAAAGACTGGAGAGAGAACTCTTAGAAATGCGACCATTTCAATCAAGT
CACAAAGTTGTAATGGCGAAAAATCCAAATCTCGACGCCTGGTATGGCGCAAGGGACTTC
GCTGGTAGCAACGATTTCGAAGACTGGTGTATATCAAAGGAAGAGTATTATGAAATGGGT
GGGGAATATTTGAAGGAGCACCACGCGAGTAACCGGTATTATAAGAGTCCAGCACCTCTC
ATTGATAACACACTGACGCCGGCGGGAGACGCTAACGTCGTCAAGGAAGAAATTGTTGTA
GACTGTTAA
Protein sequence:
MDDVLVLKDYKTIPDIVHEYAPSLKFGHIPLVIDNGSYQCRVGWSIYDEPYLTFKNLIAR
PRKDRCKKDADPPVTPPIQIGNDIVNIEAVRFQLKTQFDKNIVTHFEVQEQVCDYIFSHL
GIDSEGHVPHPIVMTEAFVTPNYSRQLMSELLFEAYGIPAVSYGVDSLFSFYRNGIGDTA
LIVNCGYHTIHFIPVLKGKVVAERARRINLGGSEIISYMHKLLQLKYPVHVNAITMSRIE
EILHEHCSIALDYQEEIRKWANPDYYEANVKRVQLPFVQSSSSSTLTAEQQKERKKEMAR
RLLEINARKREERLLEDEEQLNQLLALQELIEDGETDEFNEAIKAFDIKNYGDLQRQIAN
LNVRIEKNKQRIAAAANAEEVVETRPAGRYQPPNDPEAFQVWLEETRAKYREVSARREAR
RARRAAMAKRRTAAAAERMRAISRLAAAGDDFGYRDSDWDVYKSISREADSDSEADGERL
VELEEALREYEPAQPSQYHHQLHLAIEPIRAPELMFQPSMMGNLEAGLAETMEYVFKHFS
EEDQLLLANNVFLTGGCSQFPGLKERLERELLEMRPFQSSHKVVMAKNPNLDAWYGARDF
AGSNDFEDWCISKEEYYEMGGEYLKEHHASNRYYKSPAPLIDNTLTPAGDANVVKEEIVV
DC