| New model in OGS2.0 | DPOGS201540 |
|---|---|
| Genomic Position | scaffold570:+ 1176-6095 |
| See gene structure | |
| CDS Length | 1404 |
| Paired RNAseq reads | 2181 |
| Single RNAseq reads | 5811 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002716 (0.0) |
| Best Drosophila hit | CG5009 (7e-139) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 1 isoform b (2e-97) |
| Best NR hit (blastp) | Acyl-coenzyme A oxidase 1, peroxisomal, putative [Pediculus humanus corporis] (9e-175) |
| Best NR hit (blastx) | Acyl-coenzyme A oxidase 1, peroxisomal, putative [Pediculus humanus corporis] (3e-169) |
| GeneOntology terms | GO:0016401 palmitoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR023570 Acyl-CoA oxidase, peroxisomal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR002655 Acyl-CoA oxidase, C-terminal |
| Orthology group | MCL10186 |
Nucleotide sequence:
ATGGCCCAACTGCACACGAAAGGCAAATGCCACGGCATGCACGCCTTCATAGTCCAATTG
CGTGATGAAGAAACACACATGCCCTTACCGGGGATTAAAGTTGGTGAGATCGGCGCCAAG
CTCGGTATGAACGGCACTAACAACGGATTCCTTGGCTTCGACCAAGTCAGAATACCCAGA
GACTATATGCTAATGAAGAACGCTAAAGTTTTAGAGGACGGTACATACGTGACTGCACCA
AGCTCGAAGCTCGCGTACGGCACCATGATGTTCGTGCGAGTGATGTTGGTCAACGACATG
TGTAACTACATGGCTAAAGCGGTCACCATAGCCACCAGATACAGCGCTGTGAGGAGACAG
TCGCAGCCTAAACCCAATGAACCGGAACCCCAGATCTTGGATTACGTGACGCAGCAGCAC
AAGTTGATGATAGGTCTAGCGTCGGTCCACGCCTTCAGAACATGCGCTGATTGGCTCTGG
CAGATGTACAACAACGTCACCGCTGAACTCGAAGCGGGGGATATGGAGAGACTTCCAGAG
CTTCACGCGTTATCGTGCTGTTTGAAAGCGGTGAGTACATCAGATGCCGCTCAGTGCGTG
GAGCGCTGCAGACTGGCGTGCGGCGGACACGGGTACATGCTGTCCTCCAACTTGCCGCTC
ACATACGGTCTGGTCACGGCCGCCTGCACTTACGAAGGAGAGAATACCGTCATGTTGCTG
CAGACTGCCAGATACCTGGTGAAGGCGTGGCAGCAGGCGGCCGGTGGCCAGACTCTACCA
CCGACGGTGAGTTACCTTCGCGAGGTGGTCGCCGGTCGTCGGTCGCCACCATTCGACAAC
ACCATAGATGGTATAATCGCTGGCTTCTACCGAGTCGCCGCTGGTAAAATCGGTGCCTGT
GTGGCGCAAATAGAGAAACGTCAGAAAACAGGCATGCCATACGAGGACGCCTGGAATATG
ACATCCGTTCAACTGACTTCAGCATCGGAGGCCCACTGTCGTGCGATAATCTTGTCAACG
TACTACAAGGAGATCGAGCGTCAGAGTAACTCGGTTTCCCCCGAGCTGTCGACAGTGCTA
CGGCAGTTGGTAGACCTGTATGTGGTGTATTGGGCGCTGCAGTGCATTGGAGACCTACTC
AGGTTCACATCGATCTCTGAGCGTGACATCGACCAACTTCAGGCCTGGTACGAGGATCTC
CTCACCAGGCTTAGGCCGAACGCGGTGGGACTCGTGGACGCCTTCGACATTAGGGACGAG
ATCCTCAACTCTGCGCTGGGTGCATACGATGGCAATGCCTACGAACGTCTTATGGCGGAA
GCTATGAAGAGCCCTCTCAACAAGGAACCGGTCAATCAAAGCTTCCATCAGTACTTGAAA
CCATTGATGCAGGGAAAGCTATAG
Protein sequence:
MAQLHTKGKCHGMHAFIVQLRDEETHMPLPGIKVGEIGAKLGMNGTNNGFLGFDQVRIPR
DYMLMKNAKVLEDGTYVTAPSSKLAYGTMMFVRVMLVNDMCNYMAKAVTIATRYSAVRRQ
SQPKPNEPEPQILDYVTQQHKLMIGLASVHAFRTCADWLWQMYNNVTAELEAGDMERLPE
LHALSCCLKAVSTSDAAQCVERCRLACGGHGYMLSSNLPLTYGLVTAACTYEGENTVMLL
QTARYLVKAWQQAAGGQTLPPTVSYLREVVAGRRSPPFDNTIDGIIAGFYRVAAGKIGAC
VAQIEKRQKTGMPYEDAWNMTSVQLTSASEAHCRAIILSTYYKEIERQSNSVSPELSTVL
RQLVDLYVVYWALQCIGDLLRFTSISERDIDQLQAWYEDLLTRLRPNAVGLVDAFDIRDE
ILNSALGAYDGNAYERLMAEAMKSPLNKEPVNQSFHQYLKPLMQGKL