| New model in OGS2.0 | DPOGS203957 |
|---|---|
| Genomic Position | scaffold2:+ 231832-238763 |
| See gene structure | |
| CDS Length | 3696 |
| Paired RNAseq reads | 13 |
| Single RNAseq reads | 37 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014489 (2e-35) |
| Best Drosophila hit | CG3280 (8e-104) |
| Best Human hit | transmembrane channel-like protein 3 (8e-60) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010538 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP007628-PA, partial [Acyrthosiphon pisum] (3e-110) |
| GeneOntology terms | GO:0016021 integral to membrane |
| InterPro families | IPR012496 TMC |
| Orthology group | MCL10760 |
Nucleotide sequence:
ATGACTTCTTCGGGTGTCAATCTTTTTCATCTACCTGCCGACACACCAGCTAGTAATGAA
GTCAAATTTTCGCCAACAGCGGCAGATGGCTCTGAAGATGAAGATTACTCAAGTTTGAGT
GCCGTTCTGAAACAACGTCGAGCTAGTGTGCGTCGATCTCGTAAGGGTCGGTCAAGACGC
CCATCTTCTCCATTCTTGCCAGACGAAAATCGTTCAAGAAGAAGATCCTCCGTTTTTACT
ACCAGTTCTGGAGACACTGCTATATCCATTGATGAGCAACCAGTTGTTACCCAGGAACAA
ATTTTTGAAAACATACATCTTCACAAGGAAGTTCTTGGTTCAGTCAAACAACAACCACTT
GGAATGAGAAGGAAATTAAAAATTGTTCATCAGGCAAAAGGTTATGTTAAACGACATGAA
GGACAACTGCAAGAAAGACTTGCTCAATCCAAAAGTACGAGAGACATCTATGCGAGGTTT
AATATACTTCTAGCAAGTAAATGGCAACAAATGAAAAGGGAAGCTGCAAATACATCAAAT
CTACTCATTCCTTGGGAATTGCGCATAAAAGAAATTGAGTCGCATTTTGGCTCTGTCGTT
GCATCTTATTTTACATTTTTGAGATGGCTGTTCTGGGTGAACTTAGTCATTGGTTTTATA
TTGCTCGTATTTGTAATAATACCTGAGTACCTTACGGCAAATCCTCTTCAAGACGGAGAA
AGAAAAATTATTATGGACGATGAGTATCGTAATGCAACAAATTTATTAACGCTTTGGGAA
TTCGAAGGTGTCCTTAAATACTCTCCTATATTTTATGGCTACTATAGCAACGTGGAACGA
GACCAATATAGAATGCCACTCGCTTATTTTCTCACTGGTTTGGTCGTGTACATTTATAGT
TTTGTCGCCATATTAAGAAAAATGGCTGAAAACTCTCGAATGTCTAAGTTGTCGGAAAAA
GAAGATGAATGTATTTTTTCTTGGAAGCTTTTTACTGGTTGGGACTTTATGATAGGTAAT
GCTGAAACCGCACATAATCGTATTGCATCAGTTATATTAGGATTCAAGGAAGCTCTTCTA
GAAGAAGCCGAAAAGAAAAAGAACTTAAGAAATTGGCGAATAATATCCTTGAGAGCAGTC
GTAAACATCTGCGTTATTATTCTTTTGGCGGTTTCAGCGTATGCCGTTGTGACAGTAGTG
TATCGTTCAGACGATAACGCTAAGATACGAAGTTGGTGGCGTGAAAATGAAACCACTATA
GTGGTTACTGTAATTTCAATTACATTTCCATTGTTATTTGAACTTCTTGGTCTTTTGGAA
CACTATCATCCAAGAAAACAACTCAGATTGCAACTAGCCAGAATTATGCTTCTTAATTTA
CTTAACTTATATTCACTTATATTTGCCTTATTTAGTAAGATTGAGGGCATGAGTAAGGAA
TTAATTTCATTACAACCAACTTTAAACTTGAATGCCACAATTTTTTCTGAAAATACTTTA
AATATGAGCGAAACTCTAATAGGCACCTTACCAATAACATGTTTTGAAATAGCCGTTCCC
TATATCACTATACCTGATTATGTCTATGAAATAGATACCAGTGCCACTACAGAATCTGAA
ACAAATACAGCTAGTTCAAGTAATGAATATACGACTGTTTACACAGAAGAAACGACATAT
GTGTCTGAAGTAAATACAGAGAGCTCCTCCTCCTCCTATTTTCCTTTAACCGACGAATCA
AATTATATTACAAATAAATTATATGACATAACAGTAGAAAACGAAATAAAATCTAGCCCA
GAGATTTCTCAACAAGATATTACCACAGAAATGTCCTCGTATTATATATCGTCAGAAGAT
ATGTTTACATCTACTACTAATTTACCAAGTACTTTTGAATATGTATATGTTTGCCCAAAT
ATAAGTTTTAATTGTTCAGTAAGCTGTGGCGATAAAAATGTAACTCAAATTTTCTTCATG
TCAAATTGCACTGTTGTCAATGTTAAATGCTACATAACAAAATGTAATACATTACAAATG
AGTACTGGTGCATATAATCACAACAAAACTAACGTCACAGTTTATGACACCGTATTTTTT
GATAAATATCATAGAAAAATGTATAACTTGACCATGGGTACAAGAAAAAAGTTATTGAAA
CTTTGTTGGGAAACCATGTTTGGTCAGGAATTGGTGAAATTAACAATGATGGATCTTGTT
TTTGTTTTGTTAGGAACTTTATTTACAGATTTTTTCCGGGCATTATTTGTCAGATATATG
AATAGATGTTGGTGTTGGGATTTGGAAAAGAAATGTCCTGAATATGGAGACTTTAAAATA
GCCGAAAACATCTTACATCTTATTAACAATCAAGGGATGGTTTGGATGGGAATGTTTTTT
TCGCCAGGACTCGTTGTATTAAATGTTGTAAAACTGATGATAATGATGTATTTAAGATCG
TGGGCAGTCATGACCTGCAACGTACCACATGAAGTAGTGTTTAGAGTATCTAAGAGTAAC
AATTTTTATTTAGCATTGTTATTGACAATGTTATTTCTTTGCGTTCTACCAGTTGGCTAT
ACCATTGTTTGGGTAACACCATCATGGCACTGTGGTCCTTTTTCAGAATATGACAAGATT
TACAAGATATTGACAAATAATATCTATAAAATTTTACCAACCAGTCTTAATTTTACATTG
GAGTATATTGCTTCGCCAGCAATAGTCATACCGTTGCTAGTTTTGTTAATATTAATTATT
TACTACTTAACATCGTTGACCAATTCTCTAAGAGAAGCTAATAATGATTTAAAAATTCAA
CTAAGAAGAGAACGCACTGAAGAACGTAGAAAGATGTTTCAATTAGCAGATACAAGAAGA
AGGGGAGGATCTTCGTCAATAGACAACACACCTTTTTCAAGATGGAAAAAAGCTTTACCT
TCTCTTCCTGTATCAAAATCAATCGATTCTGATGATAGAAAAACCACAAGTGATATTACT
AAAGAACCTGCCAAAAAAACAATGAAAAAGAAAGGTGGAATATTTGCCAAAATTGTTAGC
TTAGCAATCGATAGAAAAACTAACGAGGTAACTATCAGTGATACCTCACCAATCCCAAAA
AATATTGAAGAAGAAACGGATAGCGATTTTCATGAGGTACTACCAAGAGAAATTTTAAAC
ATGAACGATATGGATGTGTCTATAAAGGTTGAAAGTAAAAGGAAAACAATCGTGGATTTT
AAAACTGAGGGAAATATAGATAAAGACCAATTTAATACTTATGATAATCTAAAAAAAACA
GAGTCACTTCCAGAAAATGGAGTTGGCCTAGAAGAAAAAAATAACGATAAAAGAAAAGCA
AGTCTCAGTGGTTCCGAAAGACATAAATCTAATTCTAGCAAACAATCTAAGCAAAATGAT
TCATTGGGGTCGGCTATACCAGTTATAACAATTAGCAATACAGAAAGCGATGACGAAGTA
TTGCAACCTCCAAATATAACTAATACCCAACATGAAATGAAAATACAGCACAGTAATAAA
GGGGAAAAGGTGAAAGGTCACCTAAAAAGAAATAAAAAATGTTCCGATCTTAAATCCTTA
AAACGTCAAAGTAGTGTCGATAGTATAAATGAAAACAAAAGTCCAAAGGAAAAGGATAAT
GAAAGCGCTGGACACAAGTATCAATATTCACTTTAA
Protein sequence:
MTSSGVNLFHLPADTPASNEVKFSPTAADGSEDEDYSSLSAVLKQRRASVRRSRKGRSRR
PSSPFLPDENRSRRRSSVFTTSSGDTAISIDEQPVVTQEQIFENIHLHKEVLGSVKQQPL
GMRRKLKIVHQAKGYVKRHEGQLQERLAQSKSTRDIYARFNILLASKWQQMKREAANTSN
LLIPWELRIKEIESHFGSVVASYFTFLRWLFWVNLVIGFILLVFVIIPEYLTANPLQDGE
RKIIMDDEYRNATNLLTLWEFEGVLKYSPIFYGYYSNVERDQYRMPLAYFLTGLVVYIYS
FVAILRKMAENSRMSKLSEKEDECIFSWKLFTGWDFMIGNAETAHNRIASVILGFKEALL
EEAEKKKNLRNWRIISLRAVVNICVIILLAVSAYAVVTVVYRSDDNAKIRSWWRENETTI
VVTVISITFPLLFELLGLLEHYHPRKQLRLQLARIMLLNLLNLYSLIFALFSKIEGMSKE
LISLQPTLNLNATIFSENTLNMSETLIGTLPITCFEIAVPYITIPDYVYEIDTSATTESE
TNTASSSNEYTTVYTEETTYVSEVNTESSSSSYFPLTDESNYITNKLYDITVENEIKSSP
EISQQDITTEMSSYYISSEDMFTSTTNLPSTFEYVYVCPNISFNCSVSCGDKNVTQIFFM
SNCTVVNVKCYITKCNTLQMSTGAYNHNKTNVTVYDTVFFDKYHRKMYNLTMGTRKKLLK
LCWETMFGQELVKLTMMDLVFVLLGTLFTDFFRALFVRYMNRCWCWDLEKKCPEYGDFKI
AENILHLINNQGMVWMGMFFSPGLVVLNVVKLMIMMYLRSWAVMTCNVPHEVVFRVSKSN
NFYLALLLTMLFLCVLPVGYTIVWVTPSWHCGPFSEYDKIYKILTNNIYKILPTSLNFTL
EYIASPAIVIPLLVLLILIIYYLTSLTNSLREANNDLKIQLRRERTEERRKMFQLADTRR
RGGSSSIDNTPFSRWKKALPSLPVSKSIDSDDRKTTSDITKEPAKKTMKKKGGIFAKIVS
LAIDRKTNEVTISDTSPIPKNIEEETDSDFHEVLPREILNMNDMDVSIKVESKRKTIVDF
KTEGNIDKDQFNTYDNLKKTESLPENGVGLEEKNNDKRKASLSGSERHKSNSSKQSKQND
SLGSAIPVITISNTESDDEVLQPPNITNTQHEMKIQHSNKGEKVKGHLKRNKKCSDLKSL
KRQSSVDSINENKSPKEKDNESAGHKYQYSL