| New model in OGS2.0 | DPOGS203219 |
|---|---|
| Genomic Position | scaffold117:+ 200062-206406 |
| See gene structure | |
| CDS Length | 2910 |
| Paired RNAseq reads | 3526 |
| Single RNAseq reads | 8689 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011500 (0.0) |
| Best Drosophila hit | suppressor of variegation 3-9, isoform B (0.0) |
| Best Human hit | eukaryotic translation initiation factor 2 subunit 3 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to heterochromatin protein isoform 2 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC001103 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006413 translational initiation GO:0005525 GTP binding GO:0003743 translation initiation factor activity GO:0000166 nucleotide binding GO:0008135 translation factor activity, nucleic acid binding GO:0003924 GTPase activity |
| InterPro families | IPR000795 Protein synthesis factor, GTP-binding IPR015256 Translation initiation factor 2, gamma subunit, C-terminal IPR001214 SET domain IPR007728 Pre-SET domain IPR000953 Chromo domain IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR016197 Chromo domain-like IPR003606 Pre-SET zinc-binding sub-group |
| Orthology group | MCL10518 |
Nucleotide sequence:
ATGACTTCGAACGAAGGAAGAGGACAAGCAAACTTGCATCAGCAAGATTTATCTAAATTA
GACGTCACAAAACTTTCTGCTTTGTCTCCCGAAGTTATATCGAGACAGGCCACTATCAAC
ATAGGTACTATTGGTCATGTAGCTCATGGAAAGTCTACAGTGGTTAAAGCCATTTCTGGA
GTTCAGACTGTCCGATTCAAGAATGAATTAGAAAGGAACATTACTATAAAATTAGAGCGC
CTGTCCGATTCAGTTATAAGAATGTATCGTGAACGAGCTGATGAAAGGAAAGAAAGGATA
TTCTTTGAAAAAATGAGAAAAAATAAAAAAAGGTCATTGCCACCCGATCCAGACGTGACT
CCTGAAAAACCACCAAAAAAGAAACAAAAGAAAAATAAACAAGAAAATGAGGAATTTATT
ATTGAAAGGATATGTGGGTTTAAGTTTCAATCAGGAAAAGAATTGTTTCATATAAAATGG
AAAGACTATAATGAGAGTGAAGCTACTTGGGAACCAGCGGAGAATCTAATTAATTGCCCA
GAAATATTACATGAATTTTTGAGTAAGGAAGAATTGAAGCATGCTGATAAGATTGAAAAA
CTAAAAGAAGAAATATCTTTTGGTAATCTACTCGAAGATGAATACCTCATTCAAAGGTTG
GATGAAGTAGAGGATTCGGAACTTACTAAATTAAAAAATGATCTCATTGTCAAACTTCTT
ACCATGATCTGTCTGAAACAAAGTGATGAACATTATGCTTCTCAACTGGTGCAGGATACA
AGAAAAATTTATCAATTATATGTCTTAACAAGGAAACGCTATCAACAACTTATGGCTCTG
AAGAATTGGGAAGATTATCTCAATCAAGTGGATATATGCAAGAAATTAACCGTTGAAAAT
GATGTTGACTTAATCGGTCCACCAGAAAATTTTACATATATCAATCATTCAATTCCCGCC
GCCGGCGTAACTATTCCGGATGAACCTCCCATCGGCTGTGAATGTGAATCATGTAATTGT
CGCTCAAAGTCCTGTTGTGGAATGCAGGCTGGTTTATTTCCTTACACAGTCAAAAGAAGA
CTTCGTGTAGCGCCCGGAACACCAGTCTACGAGTGCAATAAAGCCTGCAAATGCTCATCA
GATTGTAACAATCGCGTTGTACAAAGGGGACGTAATACTAAACTAACCATATTTCGTACA
TCCAACGGATGCGGATGGGGAGTCAGGACTGAACAGAAAATCTACCAGGGACAATTTTTA
TGCCAATATGTTGGAGAAGTCATTACTTTCGAAGAGGCAGAGAAACGTGGACGCGAATAT
GATGCTAATGGTTTAACTTATCTTTTCGATTTGGACTTTAACTCGGTTGAAAATCCGTAT
GTGGTGGATGCATGTAACCTAGGAAATGTAACTCACTTTATAAATCATTCTTGTGATCCT
AATCTGGGGGTGTGGGCTGTATGGGCTGATTGTCTAGATCCAAATTTGCCGATGTTGGCT
TTGTTTGCAACTCGTGATATTGAAGCGGGGGAGGAAATTTGTTTTGATTATTTACAAAAA
TCATTAGAAAACGAGGAAGAAACGAATACTTCTGTTGAAAATGTTGAAGAAGGCGATTCA
AATTTACCCGATGCTGCAGAAGCTAGTACTGCTGTATCTCCCGTGTCGCCCGTTAAAACG
AGATTTGAAATCCAACAACAGAATAGAGCAATGCTAAGAAATCTCACTGAGTGCAAATGT
GGTTATGCGAATGCGAAAATCTACAAATGCGACAACCCTAAATGCCCTCGTCCCACGAGC
TTTATATCAGGCGGTTCGTCCAAGGATGACAGCTTTCCGTGTCTGAGACCGGCATGTACT
GGTCGCTTCCAACTCGTTCGCCACGTTAGCTTTGTGGACTGTCCCGGTCACGACATCCTT
ATGGCCACCATGCTTAACGGCGCAGCGGTCATGGACGCCGCCCTACTGCTTATTGCGGGT
AACGAGTCCTGCCCCCAGCCTCAAACCAGTGAGCACTTGGCCGCTATAGAGATTATGAAA
CTGAAGCACATACTTATACTTCAGAATAAAATTGATTTGGTAAAGGAAGGTCAAGCTAAG
GAACAGCACGAGCAAATCGTTAAATTCGTTCAAGGAACCGTGGCGGAAGGTGCACCGATC
ATACCGATATCGGCTCAGTTGAAGTACAATATTGAGGTATTATGCGAGTACATAACAAAA
AAGATACCTGTGCCGTTACGCGACTTTACTTCCCCGCCCAGAATGATCGTGATTCGGTCT
TTCGATGTGAACAAGCCGGGATGTGAGGTCGATGATCTACGTGGAGGAGTCGCTGGCGGG
TCCATACTACAGGGTGTGCTAACCGTCGGTATGGAAATTGAGGTTCGTCCAGGTCTAGTG
AGTAAGGATGCGGACGGTAAGCTGACTTGTCGTCCGATATTTTCTCGTATCGTATCACTA
TTCGCTGAACAGAACGAGTTACAATACGCTGTTCCCGGTGGACTCATCGGTGTTGGAACT
AAGATTGAGCCGACGTTGTGTCGAGCTGACCGTCTTGTTGGACAGGTACTTGGCGCAGTG
GGAGCCCTACCTGGTATATTTGTCAAGCTTGAAGTGTCATACTATCTTCTGAAACGTCTT
CTCGGTGTGCGTACGGAGGGCGACAAAAAGGCTGCCAAAGTACAGAAATTGGCAAAGAAT
GAGGCGTTATTGGTTAACATTGGATCTCTCAGTACTGGTGGGAGAGTTATCGCTACAAAG
GCTGATTTGGCGAAAATAGCTCTTACGAGTCCCGTTTGCACCGAAATTGGAGAAAAAGTC
GCACTCAGTAGAAGAGTTGAGAACCATTGGAGGTTAATCGGTTGGGGTCAGATACAAGGA
GGAGAAACCATTGAGCCCGGAAAGAACTAA
Protein sequence:
MTSNEGRGQANLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISG
VQTVRFKNELERNITIKLERLSDSVIRMYRERADERKERIFFEKMRKNKKRSLPPDPDVT
PEKPPKKKQKKNKQENEEFIIERICGFKFQSGKELFHIKWKDYNESEATWEPAENLINCP
EILHEFLSKEELKHADKIEKLKEEISFGNLLEDEYLIQRLDEVEDSELTKLKNDLIVKLL
TMICLKQSDEHYASQLVQDTRKIYQLYVLTRKRYQQLMALKNWEDYLNQVDICKKLTVEN
DVDLIGPPENFTYINHSIPAAGVTIPDEPPIGCECESCNCRSKSCCGMQAGLFPYTVKRR
LRVAPGTPVYECNKACKCSSDCNNRVVQRGRNTKLTIFRTSNGCGWGVRTEQKIYQGQFL
CQYVGEVITFEEAEKRGREYDANGLTYLFDLDFNSVENPYVVDACNLGNVTHFINHSCDP
NLGVWAVWADCLDPNLPMLALFATRDIEAGEEICFDYLQKSLENEEETNTSVENVEEGDS
NLPDAAEASTAVSPVSPVKTRFEIQQQNRAMLRNLTECKCGYANAKIYKCDNPKCPRPTS
FISGGSSKDDSFPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAG
NESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKEGQAKEQHEQIVKFVQGTVAEGAPI
IPISAQLKYNIEVLCEYITKKIPVPLRDFTSPPRMIVIRSFDVNKPGCEVDDLRGGVAGG
SILQGVLTVGMEIEVRPGLVSKDADGKLTCRPIFSRIVSLFAEQNELQYAVPGGLIGVGT
KIEPTLCRADRLVGQVLGAVGALPGIFVKLEVSYYLLKRLLGVRTEGDKKAAKVQKLAKN
EALLVNIGSLSTGGRVIATKADLAKIALTSPVCTEIGEKVALSRRVENHWRLIGWGQIQG
GETIEPGKN