| New model in OGS2.0 | DPOGS201327 |
|---|---|
| Genomic Position | scaffold1560:+ 6436-10570 |
| See gene structure | |
| CDS Length | 945 |
| Paired RNAseq reads | 1039 |
| Single RNAseq reads | 2661 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003121 (4e-121) |
| Best Drosophila hit | TATA box binding protein-related factor 2, isoform F (8e-70) |
| Best Human hit | TATA box-binding protein-like protein 1 (1e-52) |
| Best NR hit (blastp) | tata-box binding protein [Aedes aegypti] (5e-90) |
| Best NR hit (blastx) | tata-box binding protein [Aedes aegypti] (4e-73) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0005669 transcription factor TFIID complex GO:0006367 transcription initiation from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0003704 specific RNA polymerase II transcription factor activity GO:0005667 transcription factor complex GO:0003677 DNA binding GO:0001674 female germ cell nucleus GO:0001673 male germ cell nucleus GO:0005700 polytene chromosome GO:0005634 nucleus GO:0035071 salivary gland cell autophagic cell death GO:0035075 response to ecdysone GO:0035209 pupal development |
| InterPro families | IPR000814 TATA-box binding protein IPR012294 Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal IPR012295 Beta2-adaptin/TATA-box binding, C-terminal |
| Orthology group | MCL12904 |
Nucleotide sequence:
ATGATTCATTTCCTGTTTTTAGATTTCGCCGTGGAGGTCATGGCTACACTCATCCAAGAG
AATGGTATGAAGTTGAGCAAAGGAACCCATGGTGTAGTCGTTAACCATGGCATGACGACG
CACGGTGTCCCAAATCACATGGTGCCAGACCATGAATACTGTGAATCGGGTCAGGCCGAG
CAACCCGCACAACAGTGCCTCGACGCGGAGAGCGAGCCGCATCAGCCGCCCGTCGAGGAG
GAGGAGGAAACCCCAGAAATTGACATAATGATAAACAATGTTGTGTGCAGTTTTAGTGTT
AAGTGTCACCTGAACCTGAGACAGATCGCTTTAAACGGTGTTAATGTTGAGTTCAGACGG
GAGAACGGAATGGTTACTATGAAACTCCGGCGTCCATACACCACGGCCTCTATATGGTCC
TCTGGTCGGGTCACGTGCACGGGCGCCACTAGCGAGGATCAAGCTAAAGTGGCCGCCCGC
CGCTACGCACGTGCCCTACAGAAGTTGGGCTTCCAAGTACGCTTTCGCAACTTTCGTGTT
GTAAACGTACTCGGAACTTGTAGGATGCCCTTTGGCATTCGAATTATAGCATTCTCAAAG
AAATACAAAGAAGCAGACTATGAGCCTGAACTTCATCCCGGGGTAACATACAAGTTGTAC
AATCCCAAGGCGACTCTCAAGATATTTTCCACCGGTGGTGTGACAATAACTGCTCGAAGC
GTTAGCGATGTCCAGTCGGCCGTAGAGCGCATCTTCCCGCTGGTGTACGAGTTCCGTAAG
CCTCACTCGCCCGCCGATGAGGAGAAGCTGCGTCAGAGGCGGGCGGCGCGATCGCGGGGC
GCCGGCCCACAACCCGCAGAGGAGCGGCCCCTTGAACAAGCTGCACCACAGACTGACGAC
CCCATGCACCTGGTCACACTGTCCGACGACGACGCCTGGGAGTGA
Protein sequence:
MIHFLFLDFAVEVMATLIQENGMKLSKGTHGVVVNHGMTTHGVPNHMVPDHEYCESGQAE
QPAQQCLDAESEPHQPPVEEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVEFRR
ENGMVTMKLRRPYTTASIWSSGRVTCTGATSEDQAKVAARRYARALQKLGFQVRFRNFRV
VNVLGTCRMPFGIRIIAFSKKYKEADYEPELHPGVTYKLYNPKATLKIFSTGGVTITARS
VSDVQSAVERIFPLVYEFRKPHSPADEEKLRQRRAARSRGAGPQPAEERPLEQAAPQTDD
PMHLVTLSDDDAWE