| New model in OGS2.0 | DPOGS203241 |
|---|---|
| Genomic Position | scaffold142:- 28939-34590 |
| See gene structure | |
| CDS Length | 1485 |
| Paired RNAseq reads | 1106 |
| Single RNAseq reads | 3646 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007076 (1e-86) |
| Best Drosophila hit | lethal with a checkpoint kinase (1e-44) |
| Best Human hit | E3 ubiquitin-protein ligase SMURF2 (2e-56) |
| Best NR hit (blastp) | E3 ubiquitin-protein ligase SMURF2 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | E3 ubiquitin-protein ligase SMURF2 [Bombyx mori] (1e-152) |
| GeneOntology terms | GO:0016881 acid-amino acid ligase activity GO:0006464 protein modification process GO:0005515 protein binding GO:0005622 intracellular GO:0016874 ligase activity GO:0005886 plasma membrane GO:0005634 nucleus GO:0016020 membrane GO:0005737 cytoplasm |
| InterPro families | IPR001202 WW/Rsp5/WWP IPR000569 HECT IPR008973 C2 calcium/lipid-binding domain, CaLB IPR000008 C2 calcium-dependent membrane targeting |
| Orthology group | MCL11264 |
Nucleotide sequence:
ATGTCTACTCCAGTGTCTAACCGTAAATATGGGGCACAAAAAATTAGACTTACAAGTTTA
CCGGATCCTTTTGCAAAGATATCAGTTGATGGCAGCGGTCAGGTCTATTCAACTAGTGCA
GTCAAAGCAACATTGGAACCGAAATGGAATACTCATTACGATCTGTATCTCACCAAAGGT
GAAGGAATAACAATCAGTTTGTGGAATCAACGTAAAATACATAAAAGACAAGGGTCTGGT
TTCCTGGGTTGTGTAAGAATTCAGCCGTCCACAGTTCACAAGTTGAAAGACACGGGATAT
CAATGCCTGGAGCTCTGCGAGGACAGTACGGGTGAGGTGTGCGGTGTTCGCGGTCAAGTA
ATCGTGTCGCTTCTGTCCCGGGACGGAGCCCGCGGCGAGCAGGCCTCTACTGTGGGCGAA
GGCTCCCCGCTGGCTGTAGTGGGCCCCGCGGGTGATGTTCGAGCGCCGAGAGATTCAGTC
AGTACCGAGACACCGCTACCAGCTCATTGGAAACAGAGGTTTACACCCGCTGGAAGACCT
TTCTACATAAACCATCAGCTCTGTCGATCGCAATGGGAGCGTCCGAGTACTTCCCCCCTG
TCACCGTCGTCTCCTACGGCCCCCCCGACCGTGACCCAAAATCTCCCCGTATCCCAAAAT
TCCCCCGTGTCCCCTAATTCCCCCGAATCCCCTAATTCCCCTGCGTCCCCTAGTATTGAC
ACACCGTCCTCAGTCAATGTGACGCCGATAGCGACGTCCGATCTACCGCCCGGATATGAG
ATGAGAATCACGGTTCAAGGTCAGGTGTACTTCTACAACGGCAGCACCCGCTCGTCCACG
TGGCACGACCCACGTGTCCCACAACACCTGAGACACTGCGCCGCGGTCGCCGGGCCACTA
CCGCCCGGCTGGGAGATGAGGCACACACACTCCGGACGGCCGTACTTCGTTGATCACAAC
AACCGCACTACACAGTTCACTGACCCCAGACTAGCTTTGACCACCAGAATTGTTAGTTCG
AGGAACATTTCTATTACAGCCGAACCTGACCGGATTATATTACAATTACAATCTACAAGC
CCGCCGTCTACAAACCCGAGTACTAACTGGCCTGCAGACAACGACGTTCTCCCTAAGTAC
AAAAGAGACCTCGCGGCTAAGGCGAGGGTGTTGAGAGCTGAGCTACAGGCATTACAGCCA
CAAACAGGACACTGTAGGATTGAAGTATCACGTAACGAAGTACTAGAAGAATCGTACCGT
CTCGTGATGAAGTTACGGGGTAAGGAGTTGAGGAAACGCCTGCTCGTCAAGTTCCGCGGT
GAAGAGGGGCTCGACTACGGCGGCGTGGCCCGCGAGTGGCTCCATCTATTGGGGAGGGAA
CTGTTCAACCCGCACTATGGACTGTTTCAGTACGCTAATGCTGGCGATGACAGATATGCG
TTACAGATTAATCGGCTGAGACCCCACTCATTATTCATTAAATAA
Protein sequence:
MSTPVSNRKYGAQKIRLTSLPDPFAKISVDGSGQVYSTSAVKATLEPKWNTHYDLYLTKG
EGITISLWNQRKIHKRQGSGFLGCVRIQPSTVHKLKDTGYQCLELCEDSTGEVCGVRGQV
IVSLLSRDGARGEQASTVGEGSPLAVVGPAGDVRAPRDSVSTETPLPAHWKQRFTPAGRP
FYINHQLCRSQWERPSTSPLSPSSPTAPPTVTQNLPVSQNSPVSPNSPESPNSPASPSID
TPSSVNVTPIATSDLPPGYEMRITVQGQVYFYNGSTRSSTWHDPRVPQHLRHCAAVAGPL
PPGWEMRHTHSGRPYFVDHNNRTTQFTDPRLALTTRIVSSRNISITAEPDRIILQLQSTS
PPSTNPSTNWPADNDVLPKYKRDLAAKARVLRAELQALQPQTGHCRIEVSRNEVLEESYR
LVMKLRGKELRKRLLVKFRGEEGLDYGGVAREWLHLLGRELFNPHYGLFQYANAGDDRYA
LQINRLRPHSLFIK