| New model in OGS2.0 | DPOGS206636 |
|---|---|
| Genomic Position | scaffold174:- 302602-309207 |
| See gene structure | |
| CDS Length | 2220 |
| Paired RNAseq reads | 434 |
| Single RNAseq reads | 1288 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008338 (1e-27) |
| Best Drosophila hit | deoxyribonuclease II (6e-36) |
| Best Human hit | deoxyribonuclease-2-alpha precursor (3e-47) |
| Best NR hit (blastp) | PREDICTED: similar to deoxyribonuclease ii [Nasonia vitripennis] (8e-64) |
| Best NR hit (blastx) | PREDICTED: similar to deoxyribonuclease ii [Nasonia vitripennis] (5e-62) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0003677 DNA binding GO:0004531 deoxyribonuclease II activity GO:0007275 multicellular organismal development GO:0006259 DNA metabolic process GO:0006308 DNA catabolic process GO:0005764 lysosome GO:0005515 protein binding GO:0004520 endodeoxyribonuclease activity GO:0030218 erythrocyte differentiation GO:0006915 apoptosis |
| InterPro families | IPR004947 Deoxyribonuclease II |
| Orthology group | MCL11820 |
Nucleotide sequence:
ATGGAACTAACACGCTTTGTGTCTTATATATCAAGTTTATTACTTATTATGATATTGTCA
TATTGTGTTTGTTTGACGCCTCAATGTAGAAATGAAAAAGGTGAAGCAGTGGACTGGTTC
TATGTATACAAATTACCTAGAGAGAAGAATCATTTAAATCCACTAGTGCGTAGAGGAGTC
GCTTATATGCACCTGACACCATCTAAGTTAAGAGGTGGCTGGATTATGTCGGATTTGGCA
ATAAGTGATCCACGGTCTATGGTGGGAAAAACATTAGCCCCATTATACCAGGATAAAAAT
ATTATATCATTAGTGTATAATGATCAACCTCCAGCTACGGAAAATCAACCAGATCTACTT
CAATCCGTCGCTGAGATGTATTCAAGGAGCAAGAAAGGACAGTTGAAGCAAGTGGGTGTT
AAAAAGTACAAGAAATTCAAGTTAGGCGATAAATACTATGATGATTACGACTTAGCGGAA
ATGTGTAAAATGCATTCAAAATTCATGAAGACAAGAGTTGAAAGTGGTCACACTAAAGGA
GTTATATTAGGAGATAAGTTCACATCACTGTGGCTTGTTCATTCTGTGCCTAGATTCCCT
CCTTTACCAGATATCAATAGTATGAACATGAGCTCCTATGGTTACCCAACAACGGGAACA
AAATATGGTCAATCATTTCTGTGTGTGTCCGTACAGACATCGACACTTAATCAGATTGGA
ACGCAATTGAAATACAATGAGCCACTAATAGTGTACAGTCACATTCCACAGGAGTTTGAC
AATGAGTTACCAAACTTAGTTGATGTTGTAAGGAACAAAACTATTGATGTATCACCCTGG
TACCATATAGAGAGTTTTGAAACTTTAGTTGGTAGGAAGTTTCTGTCATTTGCAAAGAGT
GCAATGTTCAATGACGACTTGTACAGTGGTTTGGTAGCCGAAGTTCTGCAATCAGATCTC
CTGGTGGAATCTTGGACTAATGGACCTGGGACTTTGGACTCGGAGTGTACAAGGAACTTC
CAAGTCCGTAACATAGAGCGTCTGAAGTTCCCTATAGCGAAGATGTCTTTCACTTCCCAT
AACGATCACTCCAAGTGGGCGGTTGCCGTCGCACATAAAATGCACAACAGTCAAGACACC
AAAGTCGCGGACTATTGGGTCTGTGTCGGGGACATTAATAGAGCGTTACCCCAGGAGTCA
CGTGGTGGGGGAACTGTTTGTACGTCAGGCCCCATACTGTGGGGTAACTTCGCTCACCTG
ATAGAAAGCGTTCAAACGTGGTATATTTACAAGCCTCCCAGCGATGTGGTGCCCTTCTTC
GAGTTTGGTCGTAACTTTACATTTATAACACCGGAGTCTAAGGGACGGTGGCAGCAATCA
AGGAAATATATAACGTCTAATTCCATGCTCCAACACACACTAGCTCCTATATACAGGCCA
ACTTACACAGACTATCTCGCCGTTGCGGTGTACGATGAGCGCAAGGGTAACAAACGTGTC
TCAGGATCTCTCTCACGAGGTGTGCTCATGGCTGATGAGATGGGCGGTGTTTGGTTACAT
CATACAGTTCCAGGACTTGTTGATTTAAACAGCGATCGTCCGACATTCCCTGAAAGCGAG
AGTTCATATGGGCACCTTATTATGTGTCTCTCAATTGACTTAGACACTATTAATTCGATA
GCATATAATTTGAGAAACGTATACCCAAAGCTGACGTATTTAAAAATACCGAAAATAATA
CAGAATTTAGTTCCCAATTGGAGGTCACTTGAGGTACCATTAAAGAGTAACGTTATAAAA
AGCCAGACCTTAATTCCGCGCGACAATTCAATAAGAGTAGAACTCCTCACCCGACCTCCT
GGTGACAAAGATTCTATATATAAGGCGTTCGCAAACTCCAAGAATATTATTTTGGACGTC
TTCGGACAAAGAGGATCGTTGTGTAAAAAAAATTATGGCGTCCGAAGTATTCAGAGTATA
TCATTGAAATATCCAGAAAAGGTTTATTACTTGAACAACAAAACAGACAAAATGCATTTC
GCTGTGAGCACAGCAGCTCATTGGCAGGTCCTGGGTTCGGGTCCCCGGCAGTATTGGACC
TGCATTAGTAATTTATTTATGGACGATAGACACGATTTAGGAGGCGATCTTGTTTGTGTC
GAGGATTATAAAATTTGGCTTACTTTTGACAATTTGAAAGTCAAAGAGCCTGAATGTTAG
Protein sequence:
MELTRFVSYISSLLLIMILSYCVCLTPQCRNEKGEAVDWFYVYKLPREKNHLNPLVRRGV
AYMHLTPSKLRGGWIMSDLAISDPRSMVGKTLAPLYQDKNIISLVYNDQPPATENQPDLL
QSVAEMYSRSKKGQLKQVGVKKYKKFKLGDKYYDDYDLAEMCKMHSKFMKTRVESGHTKG
VILGDKFTSLWLVHSVPRFPPLPDINSMNMSSYGYPTTGTKYGQSFLCVSVQTSTLNQIG
TQLKYNEPLIVYSHIPQEFDNELPNLVDVVRNKTIDVSPWYHIESFETLVGRKFLSFAKS
AMFNDDLYSGLVAEVLQSDLLVESWTNGPGTLDSECTRNFQVRNIERLKFPIAKMSFTSH
NDHSKWAVAVAHKMHNSQDTKVADYWVCVGDINRALPQESRGGGTVCTSGPILWGNFAHL
IESVQTWYIYKPPSDVVPFFEFGRNFTFITPESKGRWQQSRKYITSNSMLQHTLAPIYRP
TYTDYLAVAVYDERKGNKRVSGSLSRGVLMADEMGGVWLHHTVPGLVDLNSDRPTFPESE
SSYGHLIMCLSIDLDTINSIAYNLRNVYPKLTYLKIPKIIQNLVPNWRSLEVPLKSNVIK
SQTLIPRDNSIRVELLTRPPGDKDSIYKAFANSKNIILDVFGQRGSLCKKNYGVRSIQSI
SLKYPEKVYYLNNKTDKMHFAVSTAAHWQVLGSGPRQYWTCISNLFMDDRHDLGGDLVCV
EDYKIWLTFDNLKVKEPEC