| New model in OGS2.0 | DPOGS201026 |
|---|---|
| Genomic Position | scaffold497:+ 41781-46871 |
| See gene structure | |
| CDS Length | 576 |
| Paired RNAseq reads | 171 |
| Single RNAseq reads | 861 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009050 (8e-83) |
| Best Drosophila hit | sarcoplasmic calcium-binding protein 1 (1e-66) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to AGAP007963-PA [Tribolium castaneum] (3e-74) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP007963-PA [Tribolium castaneum] (2e-74) |
| GeneOntology terms | GO:0005509 calcium ion binding GO:0016529 sarcoplasmic reticulum |
| InterPro families | IPR002048 Calcium-binding EF-hand IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain IPR018249 EF-HAND 2 |
| Orthology group | MCL17508 |
Nucleotide sequence:
ATGGCGTACACCTGGGATAACAGGGTCGCGTTTGTTGTTCGTTATTTGTACGATATCGAC
AACAACGGCTATTTGGATGCACATGACTTTCATTGCCTCGCACTTAGAACTTGCGTTCTG
GAAGGCAAAGGTGACTGTAGCGCATCCAGACTGCAGAAGTACCAGCACATCATGATGAGC
CTGTGGGAGGAGATAGCTCAGCTCGCAGACTTCGACAAGGACGGTATTGTAACCGTGGAT
GAGTTCAAAGTAGCCGTTCAGAACAGCTGCATCGGCCGGAAGTACGAGGAGTTCCCTCAG
GCGATGAGGGCCTTCATTGAGACCAACTTTAGAATGATAGATATAAACTGTGACGGAATA
ATTGGCATCGAAGAGTTCAGGTACGACTGTGTCCAGCGCATGGTGGTCGACGACATCAGG
GTTATAGATGAGGCGTTCAACTCACTGCTAAATGACGACGACAGGAGGAAAGGAGGTCTT
GCCCTTTATAGGTATCAGGAACTATTCGCTCAATTCCTCAGCGATCAAAGTGACGACTGT
CAGGCCAACCTGCTATTCGGACCCTTAGAATTATAA
Protein sequence:
MAYTWDNRVAFVVRYLYDIDNNGYLDAHDFHCLALRTCVLEGKGDCSASRLQKYQHIMMS
LWEEIAQLADFDKDGIVTVDEFKVAVQNSCIGRKYEEFPQAMRAFIETNFRMIDINCDGI
IGIEEFRYDCVQRMVVDDIRVIDEAFNSLLNDDDRRKGGLALYRYQELFAQFLSDQSDDC
QANLLFGPLEL