| New model in OGS2.0 | DPOGS201422 |
|---|---|
| Genomic Position | scaffold931:+ 11338-15605 |
| See gene structure | |
| CDS Length | 2013 |
| Paired RNAseq reads | 266 |
| Single RNAseq reads | 711 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002576 (0.0) |
| Best Drosophila hit | CG5009 (1e-167) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 1 isoform a (1e-152) |
| Best NR hit (blastp) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | Acyl-coenzyme A oxidase 1, peroxisomal, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0016401 palmitoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR002655 Acyl-CoA oxidase, C-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR023570 Acyl-CoA oxidase, peroxisomal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR012258 Acyl-CoA oxidase |
| Orthology group | MCL10186 |
Nucleotide sequence:
ATGGTCTTAAACAAATACAAAGTAAATCCAGACCTTGCAATCGAAAGACAGAAATGCACG
TTTGACATCGAAGAGATCATTAATATATTTGATGGAGGCAAAAAAAAAACGTCACAGAGA
AGAAAAATTGAGGACATTGTACTCAAAAGTGGACTCTGCTATGACGATGTTCCTGAGGAA
TGCATGAGTCTGAAAGAGAGATACGAAAATGCTGTGAGAAAATCATGTTTATTTTCGAAA
CTAATGAAAACTGAGTTACAAGAAATAACAGGAATTGAAGATTTCGAGACTCCAGCAATT
CGTCGAATAGCAGATGCACTTTTCAAGGACATATCGCCATTTTTATTGCATTTGGGCATG
TTTGTGCCCACTATTATTGGGCAATGTACTTCTGAACAATTGATGATTTGGCTACCTAAA
GCTCTGGATCTACAAATAATCGGTGGTTACGCTCAGACGGAGCTTGGTCACGGCACGTTT
ATCCGTGGATTAGAAACAACAGCCACTTATGACGCTAGCACTGAGGAGTTTGTGCTTCAC
ACTCCAACACTTACAGCTCACAAGTGGTGGGCTGGCGGACTCGGGAAAACCATTAACCAC
TGCATAGTCGTAGCCCAACTGTACACAAAGGGTGTGTGTTACGGTACCCACTTGTTTATG
GTACAGATCAGAGATTTGGATACCCATATGCCGCTACCTGGGATTAAAGTTGGGGAAATT
GGACCTCGGATGGGTTTCTCATCAGCTGACAACGGATTCTTGGGCTTCAATAATTTTAGG
ATACCAAGAAATAACATGTTAATGAAGCACGCTCAAGTACAAAAGGATGGCACATACGTG
AAACCAGCACGTCATGGTAAATTAACATATCAAACAATGGTTTTTGTTAGAGTAAATCTT
GTCAACGAAGCTGCTTTCAATCTGTCTAAGGCTGTTACTATAGCAGTACGTTATTCTGCT
GTTAGACGACAATCTGAATTGAGACCAAATGAACCAGAGCCGCAAATTCTGGATTATCCT
ACACAACAGCACAAGCTATTCATCGGTATCGCAACAGCACACGCTTTCCAACTTGCTGCG
AACTGGTTGTGGAACACTTTCAAGTCTGTACTTTCTGATATGAAGAAAGGTGACGTGGGT
ACTCTACCAGAGCTCCACGCTTTATCAAGTTGTTTGAAAGCAGTGAGTACATCAGACGCA
GCATTACTTATAGAGCAATGTAGATATGCTTGCGGTGGTCATGGTTACATGCTCTCCTCT
AATTTGCCGTACATATACTCTTTTGTAGCCGCCACTAGGACTTATGAAGGAGACTATACC
ATATTGTTATTGCAGACCGCGAGGTTTTTGGTTAAAGCCTGGGAGCAAGCCGAGGCAGGA
AAAACAGTAACCCCTACTGTTTCTTATATAAGTCGAAGTATAAAAGGTGAAAAATTTTCT
TGGCAGAGCACTGATGAGGGCATTATCAAATCATTTCAAGCAGTTTCGGCAGGAAAAATA
GCATTGTGCGTTAAAAGTATCAGGGACAGAATGAAAAGTGGTCTTGATTATGAAGATGCC
TGGCTGTTGACAACTGTCCAACTTGTAGATGCAGCTGAGGCACATTGTCGTTCCGTAATA
TTGGAGACCTACTGGAATGAAGTAAGGAGACTAACGAAGTCTTCAAGTGATAGCGTAAAG
ATCGTAATGCATCAACTAGTTACATTGTACTTAACTTACTGGACTTTGCAGAGAACTGGG
GATTTGTTGCGGTATTCTTCGATATCAGAAAAGGACATAGATTTTATGCAACGCCAATAT
GAGGAGTTATTGCAGCAGATCAGACCGAATGCAGTTGCTCTTGTTGATGCCTTTGATTTA
AGGGATGAGATTCTGCATTCGTCTCTTGGCGCCTACGATGGCAGGGTGTACGAACGACTT
ATGGAACAGGCTGAGAATAATCCCATGAACGTAGAACCCGTCAATCAGAGCTTCTATAAA
TACATAAAACCGTTGCTTCAAGGCAAACTATGA
Protein sequence:
MVLNKYKVNPDLAIERQKCTFDIEEIINIFDGGKKKTSQRRKIEDIVLKSGLCYDDVPEE
CMSLKERYENAVRKSCLFSKLMKTELQEITGIEDFETPAIRRIADALFKDISPFLLHLGM
FVPTIIGQCTSEQLMIWLPKALDLQIIGGYAQTELGHGTFIRGLETTATYDASTEEFVLH
TPTLTAHKWWAGGLGKTINHCIVVAQLYTKGVCYGTHLFMVQIRDLDTHMPLPGIKVGEI
GPRMGFSSADNGFLGFNNFRIPRNNMLMKHAQVQKDGTYVKPARHGKLTYQTMVFVRVNL
VNEAAFNLSKAVTIAVRYSAVRRQSELRPNEPEPQILDYPTQQHKLFIGIATAHAFQLAA
NWLWNTFKSVLSDMKKGDVGTLPELHALSSCLKAVSTSDAALLIEQCRYACGGHGYMLSS
NLPYIYSFVAATRTYEGDYTILLLQTARFLVKAWEQAEAGKTVTPTVSYISRSIKGEKFS
WQSTDEGIIKSFQAVSAGKIALCVKSIRDRMKSGLDYEDAWLLTTVQLVDAAEAHCRSVI
LETYWNEVRRLTKSSSDSVKIVMHQLVTLYLTYWTLQRTGDLLRYSSISEKDIDFMQRQY
EELLQQIRPNAVALVDAFDLRDEILHSSLGAYDGRVYERLMEQAENNPMNVEPVNQSFYK
YIKPLLQGKL