| New model in OGS2.0 | DPOGS202958 |
|---|---|
| Genomic Position | scaffold1530:- 2007-4465 |
| See gene structure | |
| CDS Length | 405 |
| Paired RNAseq reads | 5 |
| Single RNAseq reads | 115 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005748 (3e-46) |
| Best Drosophila hit | Syntrophin-like 2, isoform B (2e-34) |
| Best Human hit | gamma-2-syntrophin (2e-19) |
| Best NR hit (blastp) | syntrophin [Aedes aegypti] (3e-37) |
| Best NR hit (blastx) | AGAP006633-PB [Anopheles gambiae str. PEST] (4e-34) |
| GeneOntology terms | GO:0008307 structural constituent of muscle GO:0016013 syntrophin complex GO:0008092 cytoskeletal protein binding GO:0005515 protein binding |
| InterPro families | IPR001478 PDZ/DHR/GLGF IPR015482 Syntrophin |
| Orthology group | ND |
Nucleotide sequence:
ATGATGACGCCTATAGAGGAGAGAAAAGATGAAAAGATCCGCACTGGCATGGTCCAGGTA
TCAGATGGCAAGTCTCGGCCCAGAGTTGCCCGTCTGGTGCTCACTATGGAGGCGGTGACG
GTGCAACGGGAGGTAGTGGTACCACCACCCACCAGGGACAGGACCGTGCCACATGCTAGA
GAGCGTATGGTCCAAATAACACGACAGAAAGTCGGCGGATTGGGTCTGAGTATAAAGGGT
GGGTCCGAGCACAAACTGCCCATACTGATATCCAAGATATACAAGGACCAGGCGGCGGAT
CAGACAGGACAACTGTTCGTAGGGGACGCCGTCATTAAAGGTGAGATACTTAATGCTTAC
ACTAACCTTAATGTAATTCAATTGCCATACAGAAGGATGTCATAG
Protein sequence:
MMTPIEERKDEKIRTGMVQVSDGKSRPRVARLVLTMEAVTVQREVVVPPPTRDRTVPHAR
ERMVQITRQKVGGLGLSIKGGSEHKLPILISKIYKDQAADQTGQLFVGDAVIKGEILNAY
TNLNVIQLPYRRMS