| New model in OGS2.0 | DPOGS211429 |
|---|---|
| Genomic Position | scaffold5910:- 8412-12041 |
| See gene structure | |
| CDS Length | 1305 |
| Paired RNAseq reads | 3233 |
| Single RNAseq reads | 9054 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004681 (0.0) |
| Best Drosophila hit | alpha-Tubulin at 84B (0.0) |
| Best Human hit | tubulin alpha-1B chain (0.0) |
| Best NR hit (blastp) | alpha-tubulin [Bombyx mori] (0.0) |
| Best NR hit (blastx) | alpha-tubulin [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0043234 protein complex GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0005525 GTP binding GO:0005874 microtubule GO:0007017 microtubule-based process GO:0003924 GTPase activity GO:0007018 microtubule-based movement GO:0000166 nucleotide binding |
| InterPro families | IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR008280 Tubulin/FtsZ, C-terminal IPR017975 Tubulin, conserved site IPR023123 Tubulin, C-terminal IPR002452 Alpha tubulin IPR000217 Tubulin |
| Orthology group | MCL10041 |
Nucleotide sequence:
ATGGGGGTGGCGTGTTGGCAGCTGTATTGCCTCGAGCACGGCATCAGACCTGACGGGACG
CTGCCCGGCTGTGACAGCGACGTGGCCGACTCCTGCTTCAACACATTTTTCTCTGAAGCG
GACCGAGGCAAGATGGTGCCCAGGGTGGTGATGGTAGATCTAGAAGCTACTGTTATAGAC
GAGGTCCGCACGGGCGAGTATCGTCAGTTGTATCACCCCGAGCAACTGATCACGGGCAAG
GAGGACGCCGCAAACAACTACGCGCGGGGACACTACTCGACCGGCCGCGAGGTGCTCGGA
CCGGTCATGGAGCGAGTGAGGAAGCTGGCAGACCAGTGCACCGGCCTGCAGGGTTTCTTC
GTGTTTCATTCGTTTGGAGGAGGGACGGGTTCAGGCTTTACGTCGCTTCTGATGGAGAAG
TTGTCGGACGAATTCGGCAAAAAGAGCAAACTGGAGTTCGCGATATACCCGGCGCCTCAA
GTGTCCACGGCGGTAGTTGAACCCTACAACGCGGTGCTGACGACGCACGCTACCATAAGC
CACTCGGACTGCGCCTTCATGGTGGACAACGAGGCCATATACGACATCTGCAGGAGAAGG
CTGTCCATCGAAAGACCGTCGTACGCGAATCTGAATCGGCTTATATCACAGGTGGTGTCT
TCCATCACGGCGTCTCTCCGGTTCGACGGAGCCTTGAACGTGGACTTGACGGAGTTCCAG
ACGAACCTGGTGCCCTACCCCCGGATACACTTCCCGCTCGCCGCCTACGCACCAGTCGTG
TCCGCGGACAAGGCGTACCACGAGGGTATGTCAGTGTCTGAGATCACGGCGGAACTGTTC
GAGCCTCAGAACCAGATGGTGAAGTGCGACCCTCGCGAGGGGAAGTACATGGCGTGCTGC
CTGCTGTACCGCGGGGACGTGGTGCCCAAGGACGTGAACGCGGCCATCGCGGCCATGAAG
GGGCGGGCGGGGATACGCTTCGTGGACTGGTGTCCCACTGGCTTTAAGGTGGGTATCAAC
TACCAGCCGCCGTCGGTGGTTACGGGCGGAGACCTGGCCCAGGTGAAGCGCGCCGCGTCT
ATGCTAAGCAACACGACCGCCATCGCGGAGGCGTGGGGGAAGCTTGACCACAAATTCGAC
CTCATGTACTCGAAGCGGGCCTTTGTCCATTGGTACGTGGGCGAAGGTATGGAGGAGGGG
GAATTCACGGACGCCCGGGAGGACCTCGCGGCGCTCGAGAGAGACTATGATGAGGTGGCC
ATAGAGACGTCGGACATGGCTCCGGGCTGCGAGGACGCCTTATGA
Protein sequence:
MGVACWQLYCLEHGIRPDGTLPGCDSDVADSCFNTFFSEADRGKMVPRVVMVDLEATVID
EVRTGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLGPVMERVRKLADQCTGLQGFF
VFHSFGGGTGSGFTSLLMEKLSDEFGKKSKLEFAIYPAPQVSTAVVEPYNAVLTTHATIS
HSDCAFMVDNEAIYDICRRRLSIERPSYANLNRLISQVVSSITASLRFDGALNVDLTEFQ
TNLVPYPRIHFPLAAYAPVVSADKAYHEGMSVSEITAELFEPQNQMVKCDPREGKYMACC
LLYRGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAAS
MLSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFTDAREDLAALERDYDEVA
IETSDMAPGCEDAL