New model in OGS2.0 | DPOGS211018  |
---|---|
Genomic Position | scaffold180:- 16298-17485 |
See gene structure | |
CDS Length | 444 |
Paired RNAseq reads   | 101 |
Single RNAseq reads   | 322 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006500 (4e-48) |
Best Drosophila hit   | CG11982 (6e-12) |
Best Human hit | E3 ubiquitin-protein ligase RNF181 (2e-22) |
Best NR hit (blastp)   | PREDICTED: similar to RING finger protein 181 [Tribolium castaneum] (3e-43) |
Best NR hit (blastx)   | PREDICTED: similar to RING finger protein 181 [Tribolium castaneum] (9e-40) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0005515 protein binding GO:0016874 ligase activity GO:0046872 metal ion binding |
InterPro families    | IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018957 Zinc finger, C3HC4 RING-type |
Orthology group | MCL17479 |
Nucleotide sequence:
ATGACAGATTATTTTCAAGAAATGGGATGGAGAGAATTAGAAGACGGTGAACAGCCTAAC
CATTTACTGCATATGGCTAGATTTTTAATAGATTTTGGAATGTATGATGACAACTTTACG
GGAGAATGGCCAAGGTTGCCACCTCCAGCTTCAAAAGAATCAGTAAAAAATTTAAAAGAA
GTCAAAATAGAAGATGAAAATCAGAATTGTCCAATATGCTTAAAGAAATTCAATATTAAT
GATACTGCAAAAGAAATGCCATGTCATCATTTGTTTCATGAGAAATGTATTTTAACATGG
TTAAATCAGACCAATTCATGTCCATTTTGTCGTCATGAACTTCCTACAGACAATGAAGGC
TATGAAGCTTTCAAGAAGGAAAAGAAGAGATCGGAACAGAGAAAAGAAGATATAGAAGCT
TTACATAATTCTATGTTTAGTTAA
Protein sequence:
MTDYFQEMGWRELEDGEQPNHLLHMARFLIDFGMYDDNFTGEWPRLPPPASKESVKNLKE
VKIEDENQNCPICLKKFNINDTAKEMPCHHLFHEKCILTWLNQTNSCPFCRHELPTDNEG
YEAFKKEKKRSEQRKEDIEALHNSMFS