| New model in OGS2.0 | DPOGS205845 |
|---|---|
| Genomic Position | scaffold3807:+ 8857-11672 |
| See gene structure | |
| CDS Length | 738 |
| Paired RNAseq reads | 16608 |
| Single RNAseq reads | 84371 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010867 (5e-131) |
| Best Drosophila hit | ribosomal protein S4, isoform B (8e-110) |
| Best Human hit | 40S ribosomal protein S4, X isoform X isoform (3e-106) |
| Best NR hit (blastp) | 40S ribosomal protein S4 [Bombyx mori] (2e-135) |
| Best NR hit (blastx) | 40S ribosomal protein S4 [Bombyx mori] (1e-133) |
| GeneOntology terms | GO:0022627 cytosolic small ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0005840 ribosome GO:0003723 RNA binding GO:0005811 lipid particle GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
| InterPro families | IPR002942 RNA-binding S4 IPR013845 Ribosomal protein S4e, central IPR005824 KOW IPR000876 Ribosomal protein S4e IPR013843 Ribosomal protein S4e, N-terminal |
| Orthology group | MCL15418 |
Nucleotide sequence:
ATGTTGGACAAACTGGGTGGTGTGTACGCACCACGGCCCTCCACCGGTCCACACAAGTTG
CGAGAGTGTTTGCCACTTGTTATTTTTCTACGTAACCGCCTGAAGTACGCCCTAACCGGC
AATGAGGTACTGAAAATTGTAAAGCAGCGTCTAATCAAGGTCGATGGCAAAGTCAGAACT
GATCCGACCTACCCCGCTGGCTTTATGGATGTTGTATCAATTGAGAAGACAAACGAACTG
TTCCGTCTGATCTATGATGTCAAGGGTAGATTCACTATTCACAGGATAACTCCCGAGGAG
GCCAAGTACAAGCTGTGCAAGGTCCGCCATGTCGGTACTGGTCCCAAGAACGTACCATAC
CTTGTGACGCACGATGGCCGTACCATCCGTTACCCGGATCCACTCATTAAGGTCAATGAC
TCCATCCAACTGGACATTGCCTCGTCCAAGATTATGGACTTCATCAAGTTTGAGTCTGGT
AACCTGTGCATGATCACCGGAGGTCGTAACTTGGGTCGTGTGGGCACCATCGTGTCCCGT
GAGCGTCACCCCGGTTCCTTCGACATTGTACACATCAAGGACTCTATGGGACATACTTTT
GCTACCAGATTGAACAACGTGTTCATCATCGGCAAAGGCACGAAGGCTTACATTTCTCTG
CCACGCGGTAAAGGTATCCGCCTCACCATCGCCGAGGAGCGCGACAAGCGCATCGCAGCG
AAGGTCGCCGCGCACTAG
Protein sequence:
MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT
DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPY
LVTHDGRTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGGRNLGRVGTIVSR
ERHPGSFDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAA
KVAAH