New model in OGS2.0 | DPOGS215226  |
---|---|
Genomic Position | scaffold59:+ 21342-31008 |
See gene structure | |
CDS Length | 4308 |
Paired RNAseq reads   | 2702 |
Single RNAseq reads   | 6456 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008634 (7e-91) |
Best Drosophila hit   | formin 3, isoform B (6e-143) |
Best Human hit | FH2 domain-containing protein 1 (4e-69) |
Best NR hit (blastp)   | PREDICTED: similar to formin 3 CG33556-PB [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (5e-180) |
GeneOntology terms    | GO:0003779 actin binding GO:0007424 open tracheal system development GO:0030036 actin cytoskeleton organization GO:0035147 branch fusion, open tracheal system |
InterPro families    | IPR014768 GTPase-binding/formin homology 3 IPR015425 Actin-binding FH2 IPR003104 Actin-binding FH2/DRF autoregulatory IPR016024 Armadillo-type fold IPR010472 Diaphanous FH3 |
Orthology group | MCL13090 |
Nucleotide sequence:
ATGGAGAGCCGTGTGGGTCTCGACTACATCGTAGAGCATGCGGAGTACGCCGGCAAACTC
GCGGCGGCGCTCATGACGCCAACAGCCGCTGTGAAAAAACAAGTCTTTGAACTTCTATCA
GCGCTCTGTGTGTACAACGCCGACGGATACGCCAGGGCAGTCGACACGCTCGACAGATAC
AAGACACTGAAGGGTGATCGCTACCGTCTGTCCGTGGTGGTAGAGGAACTGAAACAAGCT
ACCACCATCGACTACAAAACAGCGCTCGTGGCATTCGTCAACTGTCTGATAATATCCGCC
CCCCGGCTGCCGGACAGGATACGAGTGAGGAATGAGTTTATTGGACTCGGTTTGCTCTCT
ACGCTTAGCAGTTTAAGACACGAAGCTGCTTCTCATCCGAATCTCGGCGTTCAGCTGGAC
GTCTTCGAGGAGCAGAGAGAGAGTGACGAGGCTCACGGACCTGGAGGAATCAATCTCAAC
TCACACCTCGACGTCTTCTACGCTATACTCAAACAGGTATCAGACACCCCCCAAGAGATC
CCGTTCCTCAGTATATTGCAACACTTACTCCGAATAGACCCTAAGGAAGCTGTCAGTGAT
ATAGTGTGGGATACGGCTGAGACACTCGTACACAGAGCCACCCTGCTGGAGACGAGAGAA
GATGCTGCTAAACTACTACGAGCTCCGAGCGTTCAGACCAAAATGGTGTGCGCGTGTCAA
CACCGTGAGGCCGGCTCCGCGAGGAAGCAGAGTCTACAGCGAGCGCTGTCACCACCACCC
GCACCACCAGCTCCGCCAGCTCCGCCCGCGCCACCTGGATCTCACGCCCCCCTCCCTCCC
TTACCGCCCGCTCCCCCAGCTCCCCCTGCCCCGCCGGGTCCTCCCCGCTCGGGTCCCCCT
CCTCCTCCTCCCGCGCCGTCCACCCCCACCCCACCTCCGCCGCCAGTGGTGGACGTGAAG
CTGCCGCAGCAGGAGACTCCTCTACCGAAAACGAAAATGAAGACGATCAACTGGAACAAG
ATCCCCAACAGCAAAATCGTGGGCCAGAACAACATCTGGTCGCTGGTAGCGTCGAGTCAC
AAACACTCGCCTAAAGCAGAGCTGGACTGGACTGAGATCGAGGGGCTGTTTTGTCAACAG
ACTGAGAGAAGAATTTTAACTCTCCAGCTCCAGCCGCCAGGGTCCGCAGGCTCGTCCCCC
CGTCTCGGGCGCAGTCCCGTCTGCGACAGTTCAGGAGAACGAAAGCCCCGCAAGGAACCC
TCGGAGATCACACTCCTCGACGGGAAGCGCAGCCTCAACGTTAACATTTTCTTGAAGCAG
TTCCGCAGTTCCAACGAGGAGATCATACAAATGATCCGTGAAGGAGCTCACGACGACATC
GGCGCAGAGAAACTCCGCGGACTCTTAAAGATACTGCCCGAGATCGACGAGTGCGAGATG
CTGAAATCCTTCTCCGGTGACGTCACCAAGCTCGGGAACGCCGAGAAATTCCTCCTGCAA
CTCATCCAGCTGCCCAACTACCGTGTTCGCGTGGAGGCTCTCCTGCTGAAGGAGGAGTGG
TCGTCCACCGCAGGCGCACTGGAGACAGCGGTCAACGCGCTCCTGGTGGCGGGAGATGAC
CTCATGTCCTCGAGAGCCATACAGGAGGTGCTATACATCCTGCTGGTGGCGGGTAACTTC
CTGAACGCTGGAGGGTACGCGGGCGGAGCAGCCGGGGTCAAGCTGTCCTCGCTACAGAAG
CTCACCGACATCCGCGCCAACAAACCGGGGATGAATCTGATGCACTACGTCGCCATGCAA
GCTGAACGGAAGAACAAGGAGCTGGTGCACTTCGCGGATGACATACGAGTGCTGGAGGAG
GCCTCGAAGGCCAGCGTGGAACAGCTGCACAACGAAATACACACCCTCGCCAACAGGATC
CACACCTTGAAGAGAGATCTGCATCACACCAGCGAAGACATCCGCCTCCAGTCGGGGGAT
TTCCTCCAGGTAGCGGAACGCGAGGTGGCAGCCCTGAAAAAGGATATGGAGGAAGTGGAG
GGGATGAGGAAACAGCTCGCGGAGTTCTTCTGTGAGGATCCGGTGTCCTTTAAACTGGAA
GAGTGCTTCAAGACGTTCGTGTTATTCTGCACCAAGTTCCGTTCGGCCGTCGCAGACAAC
GAGAGACGGCGAACGCTGGAACAACAAGCGGCGGCCAGGAACAGGAACAGGAACAAGATG
CAGAAGAAGACCGGGGACGTGCTGGGGAACAACGACTTAGGCGGCAGTGTGTGCAGTACT
CCTGTGTCGGAGAGCGAGTCCCTGATGGATTCTCTGCTGCTGGACATCAGGAACGGTCTC
GGCAGACGGTCGCTAAGAAAACCCCACGAACCATCCCCGTCCCCCGACGCGACTCCACCC
GGTAGTCTCCGCCGTCGTTCCCGCGCCTCCCCGGACGAGGACGGGCTGATGGAGTTCCTC
CGCCACGCCTCCCCCGCGGCCGACGACCACAGGGAAAGAAGCGCCTGGGGAAGCCTCGAT
CGCTCCTGGTCTCGGCGGGCTCCGGTCCGCGCTCGTCTGGAGCTTCCGGACCGAGAGCGT
GCGCCCCCCTCAACCCCGCAACCCTCCACCACCCCCGGGGACAACCCCAAACCCAAGGAG
TGGCGTCAGAAGATCGAGTCCTGGCTTCGCGCGAACAGCGAGGAGGAGCGCCGGGCGCCG
TCCCCGAGCGCGGCTGCCCCGGCCTCGTCCCTGGCCCCGGCCCGGGCCCGCTCCCTCCGA
GTGCTGCATCGGCGCTCCTTGGAAAACGACTCCGAGAGCGAGCGCAGTACACTGGACACG
CTGACGGAGGGCGGCGGCGCGGCGGCGGGAGAGAGGGGCTGGAGACCGGAAGTGCCCACA
GACACGGACCTCGTGAAGGCCATCGAGGTCGTCGAAGATGTTCAGCCGAAAACAATAGAG
AACAGGATACCGTGGAGAAAGACGGAGGAGAACGAGGAGATACGGCGACTGAGGAGACAG
AGGTCACGACCGCAGATGGAGTCACAACCACTCGTGGCCATCACGGAGGAGAGGAGGAGG
CTGCCGGACATCACCGTCACCAGGGATACAGTACCGACAGACAACTCACGTAGAGGGGAG
GTCGATTCGGAGAATTTAGAGACCCCGCCCGTACAGAGGAAGATGTTCAGTCCGCCGCCT
GACAGAGAACCCTGCAGAAGATTCCTACCGGCGATATCCAACACCAATACCAACGATAAG
GCGTCCCCAGAGATGAAGGACCTCTGTCAGGAGATACTGGGCGATGGACAGTTCGACAGA
TTCTCAGCCGCGAGAAGAACGAGGCGGTACAAGAGAAGTACGGAGACCAGCTCCCCAGAA
GACGAGAAGAAGAGCGCCTCGGAGCTAGTGACGGAAACACAAGTCACAAGACCTGCGACA
CTAGAAGTACAGGCCGCGTACCCGGCGGAAGAAACGAAGGAGGTCACGAGACCCTCGGAG
ACCAGAGACGACACAGAGAACAGGTTGAAGCGGTGGCAGGAACGATTGAAAAACCAAAGC
AAAGACAAAACGCCAGCCAAAGACAAGGTGCCGTACTCGAGAATGAGGCGGCAGACCTCC
ATCAACCAAGAAGACGTCCAGAAAGCTATCAGGGAGCTGAAGTCTCCGACGCAGTCTCCC
GCGGGCGTGTGGTCCAGGAACGCTTACAGGAGGTCTTTCAACGCTAAAACGGACAAGGTA
ACGCCCACAGCCCCCGCTCCTGCCCCCGCCGCCGCCACCGGCAGCGGCACTCACGACAGA
ACAACGTCCCCGAGGATCTTGAAAGTGAAAAGCGAACACGAACTCAACGACGAGGGCTTC
GAGGAGACGCAGAGTCTGAACTCGGAGAGCGCCTCGCAGGGAGCGTCCTCGGGCTGCGGG
GTCGACTGCGAGTCACCCGTTCCCAAGAAAAACACAGAAATCCCAAAGAAAATAGCTACC
AAAGACACGAGGCCGCCTCCGCGGACGCCGCTCGACCCCAGGCGAAGTCTCCCGCGGAGG
CCGACCTCTCTGCGGGTAGAGCGCTCCGCGTCCAGGGCGTCTCTGAGGAGCTCCCGGAGT
TCCTTGAACAGCTCGGCGTCCGTGGCGACCGTCAAGCGAGCGCCCACCATCAAACCCGTC
CCCAAGCCGATCCCCAAACCGGCGCCCAGGGTACCGGCCTCCCGGTCCTCGTCCAGCGGC
AGCTCCATCGGCACCTCCAGGCCCAAGGCCGACAAGACGTCCGGCTTCATGAGGCCCACG
CAGGCCTCCAAGGTCCGAGGGTCCGCGGCGAAGACGAGCGCCAAGTGA
Protein sequence:
MESRVGLDYIVEHAEYAGKLAAALMTPTAAVKKQVFELLSALCVYNADGYARAVDTLDRY
KTLKGDRYRLSVVVEELKQATTIDYKTALVAFVNCLIISAPRLPDRIRVRNEFIGLGLLS
TLSSLRHEAASHPNLGVQLDVFEEQRESDEAHGPGGINLNSHLDVFYAILKQVSDTPQEI
PFLSILQHLLRIDPKEAVSDIVWDTAETLVHRATLLETREDAAKLLRAPSVQTKMVCACQ
HREAGSARKQSLQRALSPPPAPPAPPAPPAPPGSHAPLPPLPPAPPAPPAPPGPPRSGPP
PPPPAPSTPTPPPPPVVDVKLPQQETPLPKTKMKTINWNKIPNSKIVGQNNIWSLVASSH
KHSPKAELDWTEIEGLFCQQTERRILTLQLQPPGSAGSSPRLGRSPVCDSSGERKPRKEP
SEITLLDGKRSLNVNIFLKQFRSSNEEIIQMIREGAHDDIGAEKLRGLLKILPEIDECEM
LKSFSGDVTKLGNAEKFLLQLIQLPNYRVRVEALLLKEEWSSTAGALETAVNALLVAGDD
LMSSRAIQEVLYILLVAGNFLNAGGYAGGAAGVKLSSLQKLTDIRANKPGMNLMHYVAMQ
AERKNKELVHFADDIRVLEEASKASVEQLHNEIHTLANRIHTLKRDLHHTSEDIRLQSGD
FLQVAEREVAALKKDMEEVEGMRKQLAEFFCEDPVSFKLEECFKTFVLFCTKFRSAVADN
ERRRTLEQQAAARNRNRNKMQKKTGDVLGNNDLGGSVCSTPVSESESLMDSLLLDIRNGL
GRRSLRKPHEPSPSPDATPPGSLRRRSRASPDEDGLMEFLRHASPAADDHRERSAWGSLD
RSWSRRAPVRARLELPDRERAPPSTPQPSTTPGDNPKPKEWRQKIESWLRANSEEERRAP
SPSAAAPASSLAPARARSLRVLHRRSLENDSESERSTLDTLTEGGGAAAGERGWRPEVPT
DTDLVKAIEVVEDVQPKTIENRIPWRKTEENEEIRRLRRQRSRPQMESQPLVAITEERRR
LPDITVTRDTVPTDNSRRGEVDSENLETPPVQRKMFSPPPDREPCRRFLPAISNTNTNDK
ASPEMKDLCQEILGDGQFDRFSAARRTRRYKRSTETSSPEDEKKSASELVTETQVTRPAT
LEVQAAYPAEETKEVTRPSETRDDTENRLKRWQERLKNQSKDKTPAKDKVPYSRMRRQTS
INQEDVQKAIRELKSPTQSPAGVWSRNAYRRSFNAKTDKVTPTAPAPAPAAATGSGTHDR
TTSPRILKVKSEHELNDEGFEETQSLNSESASQGASSGCGVDCESPVPKKNTEIPKKIAT
KDTRPPPRTPLDPRRSLPRRPTSLRVERSASRASLRSSRSSLNSSASVATVKRAPTIKPV
PKPIPKPAPRVPASRSSSSGSSIGTSRPKADKTSGFMRPTQASKVRGSAAKTSAK