| New model in OGS2.0 | DPOGS210890 |
|---|---|
| Genomic Position | scaffold70:- 206554-210566 |
| See gene structure | |
| CDS Length | 966 |
| Paired RNAseq reads | 1605 |
| Single RNAseq reads | 4251 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003767 (4e-139) |
| Best Drosophila hit | Aut1 (4e-112) |
| Best Human hit | ubiquitin-like-conjugating enzyme ATG3 (5e-103) |
| Best NR hit (blastp) | autophagy related protein Atg3-like protein [Bombyx mori] (7e-145) |
| Best NR hit (blastx) | autophagy related protein Atg3-like protein [Bombyx mori] (8e-141) |
| GeneOntology terms | GO:0006914 autophagy |
| InterPro families | IPR007134 Autophagy-related protein 3, N-terminal IPR007135 Autophagy-related protein 3 IPR019461 Autophagy-related protein 3, C-terminal |
| Orthology group | MCL14158 |
Nucleotide sequence:
ATGCAGAGCGTAATAAACACAGTAAAGGGAACCGCCCTCGGGGTAGCAGGGTACTTGACG
CCTGTATTAAAGGAATCTAAATTTCAAGAGACTGGAGTGTTGACCCCTGAAGAGTTTGTT
GCGGCCGGAGATCACTTAGTCCACCACTGCCCAACTTGGCAGTGGGCCAAGGGTGAAGAG
TCCAAAATCAGGCCCTACTTGCCCTCTGACAAGCAGTTCCTCATAACCAGAAATGTTCCA
TGCTATAGGCGCTGTAAACAGATAGAATATTGTGATGAACATGAAAAGACAATAGAAGAT
GAGAATGACGAGGACGGAGGCTGGGTGGACACACATCACTACGCCTCACCAGGGTTCCCT
GCAGTTGAAGAGAAGGTGTGTGAGATGACGTTAGAGGCGGCCGAGGCTGGGGACAGTGAT
GGCGAGGGAGGCGGAGACGGCGATGAAGCTGATGGTGACGATGACGCTGATGATGATGAG
GCCGAGGACATGGAGAACTTCCAGGAGTCTGGACTACTCGATGAAGTGGACCCATCTACA
GCGCTGACGACCCGCAAGGAGCCGAGGAAGACGGTGAAACACACGGACGGCGACGAGATA
GTGAAGACGAGGACCTACGACCTCCACATCACATACGATAAGTACTACCAGACGCCGCGC
CTCTGGCTCATCGGATACGACGAGGAGCGGCGGCTGCTGAGTGTGGAGGCCATGTACGAG
GACGTGTCCCAGGACCACGCCAAGAAGACCGTCACCATGGAGACGCACCCACACCTCTCC
GGACCCAGCATGGCGTCCGTACATCCCTGCAGACACGCGGAGGTGATGAAGAAGATCATC
GAGACGGTGATGGAGAGCGGCGGCGCGCTGGCCGTGCACTCCTACCTCATAGTGTTCCTG
AAGTTCGTGCAGACCGTCATCCCCACCATCGAGTACGACTTCACGCAGAACTTCTCCATG
AACTGA
Protein sequence:
MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE
SKIRPYLPSDKQFLITRNVPCYRRCKQIEYCDEHEKTIEDENDEDGGWVDTHHYASPGFP
AVEEKVCEMTLEAAEAGDSDGEGGGDGDEADGDDDADDDEAEDMENFQESGLLDEVDPST
ALTTRKEPRKTVKHTDGDEIVKTRTYDLHITYDKYYQTPRLWLIGYDEERRLLSVEAMYE
DVSQDHAKKTVTMETHPHLSGPSMASVHPCRHAEVMKKIIETVMESGGALAVHSYLIVFL
KFVQTVIPTIEYDFTQNFSMN