New model in OGS2.0 | DPOGS214469  |
---|---|
Genomic Position | scaffold690:+ 25921-27039 |
See gene structure | |
CDS Length | 1119 |
Paired RNAseq reads   | 155 |
Single RNAseq reads   | 453 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013355 (3e-180) |
Best Drosophila hit   | shaker cognate l, isoform A (0.0) |
Best Human hit | potassium voltage-gated channel subfamily D member 2 (2e-165) |
Best NR hit (blastp)   | PREDICTED: similar to Shaker cognate l CG9262-PB [Acyrthosiphon pisum] (0.0) |
Best NR hit (blastx)   | GH14392 [Drosophila grimshawi] (0.0) |
GeneOntology terms    | GO:0005886 plasma membrane GO:0006813 potassium ion transport GO:0005249 voltage-gated potassium channel activity GO:0016021 integral to membrane GO:0008076 voltage-gated potassium channel complex GO:0055085 transmembrane transport GO:0005515 protein binding GO:0005250 A-type (transient outward) potassium channel activity |
InterPro families    | IPR003131 Potassium channel, voltage dependent, Kv, tetramerisation IPR005821 Ion transport IPR021645 Shal-type voltage-gated potassium channels IPR011333 BTB/POZ fold IPR000210 BTB/POZ-like IPR003091 Voltage-dependent potassium channel IPR003975 Potassium channel, voltage dependent, Kv4 IPR003968 Potassium channel, voltage dependent, Kv |
Orthology group | MCL10929 |
Nucleotide sequence:
ATGGCGTCCGTCGCCGCATGGCTGCCGTTCGCGCGCGCCGCCGCCATCGGCTGGGTGCCC
ATAGCCACACACCCGCTGCCTTCCCCGCCCGTCCCCAAGGACCGAAGACGAGCCGAGGAT
GAGAAACTACTCATTAACGTCTCCGGACGACGCTTCGAAACTTGGAGGAACACTCTTGAA
AAATACCCCGATTCCCTCCTCGGATCCTCTGAGAGGGAATTCTTTTACGATGAGGATAGT
CGGGAATACTTCTTCGACAGAGATCCGGATATCTTTAGACATATACTCAATTATTATAGG
ACCGGGAAGCTCCATTATCCAAAACATGAATGTTTGACTGGATATGACGAGGAGCTCGCG
TTCTTCGGAATCCTGCCAGATGTTATAGGTGACTGTTGTTATGAGGACTACAGGGATAGA
AAACGTGAAAATGCTGAGCGTCTCATGGACGACAAGCTCAGCGAGGCCGGAGACCAGAGC
CTGCCTCAATTGACGGATTTACGACAAAAGATGTGGAGGGCCTTCGAAAACCCACACACG
TCGACAGCTGCTCTAGTATTTTACTACGTTACAGGATTCTTCATCGCCGTCTCCGTGATG
GCCAACGTGGTCGAGACGGTACCATGTGGTCACAGACCGGGCCGTGCGGGCACTCTACCT
TGTGGAGAGCGATATAAAATTGTGTTCTTTTGTTTGGACACAGCATGCGTGATGATTTTC
ACTGCTGAATACTTGCTGCGACTGTTCGCGGCGCCCGACCGATGTAAGTTCGTGAGATCA
GTCATGTCCATCATCGACGTGGTGGCCATCCTGCCGTACTACATCGGCCTGGGGATCACC
GACAACGACGACGTTTCCGGGGCGTTTGTGACCTTGAGAGTGTTTCGAGTGTTCCGTATC
TTCAAGTTCTCCCGTCACTCACAGGGTCTCCGGATCTTGGGTTATACTCTGAAGTCTTGC
GCCAGCGAATTGGGTTTCCTAGTGTTCTCTCTGGCGATGGCTATCATTATATTCGCGACG
GTCATGTTCTACGCTGAGAAGAACGAGCAGGACACCAACTTTACATCCATCCCCGCCGCT
TTCTGGTACACCATCGTCACCATGACCACTCTGGGGTAA
Protein sequence:
MASVAAWLPFARAAAIGWVPIATHPLPSPPVPKDRRRAEDEKLLINVSGRRFETWRNTLE
KYPDSLLGSSEREFFYDEDSREYFFDRDPDIFRHILNYYRTGKLHYPKHECLTGYDEELA
FFGILPDVIGDCCYEDYRDRKRENAERLMDDKLSEAGDQSLPQLTDLRQKMWRAFENPHT
STAALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIF
TAEYLLRLFAAPDRCKFVRSVMSIIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNEQDTNFTSIPAA
FWYTIVTMTTLG