DPGLEAN19877 in OGS1.0

New model in OGS2.0DPOGS214469 
Genomic Positionscaffold690:+ 25921-27039
See gene structure
CDS Length1119
Paired RNAseq reads  155
Single RNAseq reads  453
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013355 (3e-180)
Best Drosophila hit  shaker cognate l, isoform A (0.0)
Best Human hitpotassium voltage-gated channel subfamily D member 2 (2e-165)
Best NR hit (blastp)  PREDICTED: similar to Shaker cognate l CG9262-PB [Acyrthosiphon pisum] (0.0)
Best NR hit (blastx)  GH14392 [Drosophila grimshawi] (0.0)
GeneOntology terms






  
GO:0005886 plasma membrane
GO:0006813 potassium ion transport
GO:0005249 voltage-gated potassium channel activity
GO:0016021 integral to membrane
GO:0008076 voltage-gated potassium channel complex
GO:0055085 transmembrane transport
GO:0005515 protein binding
GO:0005250 A-type (transient outward) potassium channel activity
InterPro families






  
IPR003131 Potassium channel, voltage dependent, Kv, tetramerisation
IPR005821 Ion transport
IPR021645 Shal-type voltage-gated potassium channels
IPR011333 BTB/POZ fold
IPR000210 BTB/POZ-like
IPR003091 Voltage-dependent potassium channel
IPR003975 Potassium channel, voltage dependent, Kv4
IPR003968 Potassium channel, voltage dependent, Kv
Orthology groupMCL10929

Nucleotide sequence:

ATGGCGTCCGTCGCCGCATGGCTGCCGTTCGCGCGCGCCGCCGCCATCGGCTGGGTGCCC
ATAGCCACACACCCGCTGCCTTCCCCGCCCGTCCCCAAGGACCGAAGACGAGCCGAGGAT
GAGAAACTACTCATTAACGTCTCCGGACGACGCTTCGAAACTTGGAGGAACACTCTTGAA
AAATACCCCGATTCCCTCCTCGGATCCTCTGAGAGGGAATTCTTTTACGATGAGGATAGT
CGGGAATACTTCTTCGACAGAGATCCGGATATCTTTAGACATATACTCAATTATTATAGG
ACCGGGAAGCTCCATTATCCAAAACATGAATGTTTGACTGGATATGACGAGGAGCTCGCG
TTCTTCGGAATCCTGCCAGATGTTATAGGTGACTGTTGTTATGAGGACTACAGGGATAGA
AAACGTGAAAATGCTGAGCGTCTCATGGACGACAAGCTCAGCGAGGCCGGAGACCAGAGC
CTGCCTCAATTGACGGATTTACGACAAAAGATGTGGAGGGCCTTCGAAAACCCACACACG
TCGACAGCTGCTCTAGTATTTTACTACGTTACAGGATTCTTCATCGCCGTCTCCGTGATG
GCCAACGTGGTCGAGACGGTACCATGTGGTCACAGACCGGGCCGTGCGGGCACTCTACCT
TGTGGAGAGCGATATAAAATTGTGTTCTTTTGTTTGGACACAGCATGCGTGATGATTTTC
ACTGCTGAATACTTGCTGCGACTGTTCGCGGCGCCCGACCGATGTAAGTTCGTGAGATCA
GTCATGTCCATCATCGACGTGGTGGCCATCCTGCCGTACTACATCGGCCTGGGGATCACC
GACAACGACGACGTTTCCGGGGCGTTTGTGACCTTGAGAGTGTTTCGAGTGTTCCGTATC
TTCAAGTTCTCCCGTCACTCACAGGGTCTCCGGATCTTGGGTTATACTCTGAAGTCTTGC
GCCAGCGAATTGGGTTTCCTAGTGTTCTCTCTGGCGATGGCTATCATTATATTCGCGACG
GTCATGTTCTACGCTGAGAAGAACGAGCAGGACACCAACTTTACATCCATCCCCGCCGCT
TTCTGGTACACCATCGTCACCATGACCACTCTGGGGTAA

Protein sequence:

MASVAAWLPFARAAAIGWVPIATHPLPSPPVPKDRRRAEDEKLLINVSGRRFETWRNTLE
KYPDSLLGSSEREFFYDEDSREYFFDRDPDIFRHILNYYRTGKLHYPKHECLTGYDEELA
FFGILPDVIGDCCYEDYRDRKRENAERLMDDKLSEAGDQSLPQLTDLRQKMWRAFENPHT
STAALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGTLPCGERYKIVFFCLDTACVMIF
TAEYLLRLFAAPDRCKFVRSVMSIIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNEQDTNFTSIPAA
FWYTIVTMTTLG