| New model in OGS2.0 | DPOGS204057 |
|---|---|
| Genomic Position | scaffold2840:- 7343-11434 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 385 |
| Single RNAseq reads | 1169 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010731 (2e-62) |
| Best Drosophila hit | vacuolar protein sorting 16B (2e-25) |
| Best Human hit | VPS33B-interacting protein isoform 2 (2e-23) |
| Best NR hit (blastp) | Vps16B [Culex quinquefasciatus] (1e-49) |
| Best NR hit (blastx) | Vps16B [Culex quinquefasciatus] (1e-47) |
| GeneOntology terms | GO:0061008 hepaticobiliary system development GO:0005768 endosome GO:0015031 protein transport GO:0006350 transcription GO:0045449 regulation of transcription GO:0006810 transport |
| InterPro families | IPR019177 Golgin subfamily A member 5 |
| Orthology group | MCL13945 |
Nucleotide sequence:
ATGGATGATGATGACTATTGGAATACAAGCGAAACTAAAGCCAAAGCTTTTAGTTTCGAC
GATGATGTGCTATCAACTCGCGAGATTCTGGCCATAGGTCAGAAATCACACCCTGGCCAA
TCAGTTGACAGTGTGTTTACTACTTTAAATGACGCCCGAACTGAACTGCTGCCAATATCC
AGTCTAGTGTCACCCAAAGTTTTAGACTTGATGATACTAGCACAGTCGGGCAGAGATCCG
AACAACATCAAAGATTCCGAACAAACTTTAGCAATAACACTGAAGAGGATCATATTGGGT
CGCTCATTCTCTCTGCATCAATACAAGAGCTTGAGAAATAAAACAGAATTATTAGATGGC
ACTATAAGTATTGGGGATGGAAATGCAATTTTAACTGTCGTGTTATATTTGATACAAACA
TTGAATAAGAAATTGGTGTATGAACTATTGAGCGCTCGACCTTTGGCATTAAATCATTAT
ATTAGTTTTTTACAAACTGAGGGGAAAATAACAGAATTAACTGATTTATTAACAATGCTA
GGCAGAAGTTCTGAGGCAGCTGTCTTTCAATTCCAGCACATAGTAAAAACTCAAGGGAAC
AGTATTGACGGTTTGTTACGGAAAGTGAATAATTTGCTATCAAATCACTTCAACCAACCC
GGTATGGACGCTCATCAGAACAAAATGGTGGCGGATTACATTAAACTGTTAGAATGGCAG
AAGTGTAGTTCTATCCCAGAGCTTTACAACGCATCAGCTCTGTCCTGTCTATTACACTGT
GTAACACATCATTGGACTGAGGGCGCGGGAAATATGATGTCACCACTGACACTATGTCAG
AGACAACAGGTCACACCCCTTCAGTATGATTGGGTTGTGTTAAACATTCACGCTAATACA
AATAAATGGGACGTCGTTGAATCTTTGTTCACAAAAAAAGACTGGCTCGGCCGGACGACA
GTATCGTCTCACATACCGATAGAGACTTTAATATCTCGTTTAAGCGAACTTAAGGCTTCG
GTTCAAATTATCGCCACGTGCCTGAATAAATTAACCAACACTGAAGATAGATTGAGATTG
GCGCAGAAGTACAAGGTAAGTTAA
Protein sequence:
MDDDDYWNTSETKAKAFSFDDDVLSTREILAIGQKSHPGQSVDSVFTTLNDARTELLPIS
SLVSPKVLDLMILAQSGRDPNNIKDSEQTLAITLKRIILGRSFSLHQYKSLRNKTELLDG
TISIGDGNAILTVVLYLIQTLNKKLVYELLSARPLALNHYISFLQTEGKITELTDLLTML
GRSSEAAVFQFQHIVKTQGNSIDGLLRKVNNLLSNHFNQPGMDAHQNKMVADYIKLLEWQ
KCSSIPELYNASALSCLLHCVTHHWTEGAGNMMSPLTLCQRQQVTPLQYDWVVLNIHANT
NKWDVVESLFTKKDWLGRTTVSSHIPIETLISRLSELKASVQIIATCLNKLTNTEDRLRL
AQKYKVS