| New model in OGS2.0 | DPOGS211153 |
|---|---|
| Genomic Position | scaffold540:+ 24737-25930 |
| See gene structure | |
| CDS Length | 1194 |
| Paired RNAseq reads | 542 |
| Single RNAseq reads | 1285 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003139 (1e-127) |
| Best Drosophila hit | msta, isoform A (3e-52) |
| Best Human hit | SET and MYND domain-containing protein 3 isoform 1 (1e-14) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014347 [Tribolium castaneum] (7e-68) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014347 [Tribolium castaneum] (2e-66) |
| GeneOntology terms | GO:0016564 transcription repressor activity GO:0005737 cytoplasm GO:0016481 negative regulation of transcription GO:0005634 nucleus |
| InterPro families | IPR001214 SET domain |
| Orthology group | MCL16930 |
Nucleotide sequence:
ATGGTGTCTAGAGAACAATTATCGGTTATGATCAAACATCATCTGGGTCTACTCGCTTTT
GGCGATGAGGATAAATATTCCGTGAAGTGGGCCGTCTACGAATCTCCTCTGGGAGGTAGG
GGACTGGTAGCTACTCAGGATATCAAGGCCGGTGAAGTTTTATTCGTTGATTATCCATTA
GTATACGGACCCCGGTCCGGAATTATTGTGCAACGAGGATGTACCGTCTGCAAAAATATT
GATAGTGACATATTTTTTAAATGTTCAAAGTGTGCATTAATTTTGTGTTCCGTGCAATGT
CAAAACAGTGATTTTCATTCAGGTGACTGTAGTATAATTTCCCATTGGCCTAACAAAGTG
CCAATTGAGGAAGTTGACGACACTCTTTTATCGCGCGCACTGACTGCAATACGAGCACTG
TTATTAAATGAAGATCAGAAATACTTGTTGACTTCCTTACAAGCCAATAAACTGCCACAG
TATGGCAGCGAAATAAGAGATCTGAAACAATACTTCGATATTCCCTTACACGAAGAAGAA
TTCATGATCTTAGTAATATGTATTCTTAACACAAATGCCTTTCAGATGGCCACACCGTAT
GGTAAAAAGGAAATGAGTTTGCGTGGATTATACCCTGTCGCATCCATTTTGAATCACAAC
TGTGTACCAAACACAAGAAACTGTTTTAATGGTGACTTACAAATGACCGTAAAGGCCACG
AAAACCATCAACGCCGGTAGCGAAATATTCACATGTTACTCGGGTATGCTCTGGGGAACA
CCAGCCCGACGTCTATATCTATATAAAAGCAAGCATTTCTTGTGTGATTGTGAGCGTTGC
GCGGATCCAACCGAGAGAGGTACGTTGCTGGCTGCCCTAAAATGTTTCTCAACAGAGTGC
CAGGGCTCACTACTACCGATACAACCATTAAAAACAACCACAGCTTGGCGCTGTCTAGAA
TGTGGGATGAGAGTGCCAAATGATAACATTTGTGTTATACAGAGCGCGTTAGGTAGTCTT
ATGGGATCATTGGATCTGAAAAACGTCGATGAATTAGAAAATTTCTATTTAAACAGAATC
ACTAGATACGTTCCAAGAACAAATCAAATAGTATTGGATCTACAATGTCGTCTCGTTTGG
GAGCTTGGCGAAACGGATGGACTTCGATGGAATGGTAAGTTTACCGAAACATAA
Protein sequence:
MVSREQLSVMIKHHLGLLAFGDEDKYSVKWAVYESPLGGRGLVATQDIKAGEVLFVDYPL
VYGPRSGIIVQRGCTVCKNIDSDIFFKCSKCALILCSVQCQNSDFHSGDCSIISHWPNKV
PIEEVDDTLLSRALTAIRALLLNEDQKYLLTSLQANKLPQYGSEIRDLKQYFDIPLHEEE
FMILVICILNTNAFQMATPYGKKEMSLRGLYPVASILNHNCVPNTRNCFNGDLQMTVKAT
KTINAGSEIFTCYSGMLWGTPARRLYLYKSKHFLCDCERCADPTERGTLLAALKCFSTEC
QGSLLPIQPLKTTTAWRCLECGMRVPNDNICVIQSALGSLMGSLDLKNVDELENFYLNRI
TRYVPRTNQIVLDLQCRLVWELGETDGLRWNGKFTET