New model in OGS2.0 | DPOGS202206  |
---|---|
Genomic Position | scaffold121:- 7472-10822 |
See gene structure | |
CDS Length | 1353 |
Paired RNAseq reads   | 632 |
Single RNAseq reads   | 1478 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013500 (0.0) |
Best Drosophila hit   | gamma-Tubulin at 23C (0.0) |
Best Human hit | tubulin gamma-1 chain (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to LOC495938 protein [Nasonia vitripennis] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to LOC495938 protein [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0051258 protein polymerization GO:0005525 GTP binding GO:0000166 nucleotide binding GO:0003924 GTPase activity GO:0005856 cytoskeleton GO:0005874 microtubule GO:0005827 polar microtubule GO:0005737 cytoplasm GO:0007017 microtubule-based process GO:0005813 centrosome |
InterPro families    | IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR023123 Tubulin, C-terminal IPR000217 Tubulin IPR017975 Tubulin, conserved site IPR008280 Tubulin/FtsZ, C-terminal IPR002454 Gamma tubulin |
Orthology group | MCL10669 |
Nucleotide sequence:
ATGCCGAGTGAAATGATAACATTGCAACTGGGACAATGTGGGAATCAAATTGGATTTGAA
TTTTGGAAGCAGCTTTGCATAGAACATGGAATATCGCCGGAGGGAATTTTAGAAGAGTTT
GCTTCAGCGGGCTCTGATCGAAAAGATGTGTTTTTCTACCAAGCAGATGATGATCATTAC
ATCCCGAGGGCAGTCCTTCTGGACCTGGAACCTCGTGTTATTCACACTATTATGAATTCC
CCTTATGCGAAACTTTACAATCCCGAAAATGTATATTTATCAAAGCATGGTGGTGGAGCG
GGTAACAATTGGGCATCCGGCTTTGCTCAGGGAGAGAAGTTGAATGAGGAAGTATTTGAC
ATAATTAACAGGGAGGCTGACGGAAGTGATAACCTAGAGGGTTTTGTGTTGTGCCATTCT
ATAGCTGGTGGCACTGGGTCAGGTATGGGCTCCTACATCCTGGAACACCTCTCGGATAGA
TTTCCCAAGAAACTAGTGCAAACTTACAGCGTGTTCCCTAATTTGGATGAGATAAGTGAC
GTAGTGGTCCAGCCGTACAATTCACTGTTGACTTTGAAGCGTCTCACCGAGAGTGCCGAC
TGTGTGATGGTGTTAGACAACACAGCCCTCAACAGGATAGCGAGTGATCGTCTCCACATA
CAGAATCCATCATTCGCTCAGATCAATACCCTGGTGTCAACTATCATGAGCGCCAGTACT
GCTACTCTCAGGTACCCTTCTTACATGAATAATGATCTGATCAGTCTGGTGGCTCCTCTC
ATACCAACTCCTCGGCTCCACTTCCTCATGACAGGTTACACTCCGCTATCGGCCGACCAT
GATGCTCCGAAAATAAGGAAGACCACTGTCCTGGACGTGATGCAAAGACTGCTGCAGCCA
AAGAACATGATGGTGTCATTGAGTCCGGACCGAGCCAACCAACACTGCTATATATCGATA
CTGAACATCATTCAGGGTGAGGTAGATCCGTCCCAGGTCCACAAGTCACTACAACGTATC
CGAGAGCGGAAATTAGCCTGCTTCATACCGTGGGGACCAGCCTCTATACAAGTGGCGCTG
TCCCGGCGTTCCCCGCACGTCACCGCTGAACATAAAGTATCTGGACTCCTGCTGGCAAAT
CATACAAACATCTCATCCCTGTTCGACCGGTGTCTCCAGCAGTTCGACAAGCTGAGGAAG
CGTGAGGCGTTCCTCGAGGTGTTCCGCAAGGAGCCTATGTTCCACGAATCTCTAGAGGAG
TTCGACGCGTCACGTGGAGTGGTCGATGACCTGGTGCACGAGTACCGAGCCGCCGCCACC
CCCGACTACGTGCACTGGAACCCGGGTACGTAA
Protein sequence:
MPSEMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHY
IPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASGFAQGEKLNEEVFD
IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFPKKLVQTYSVFPNLDEISD
VVVQPYNSLLTLKRLTESADCVMVLDNTALNRIASDRLHIQNPSFAQINTLVSTIMSAST
ATLRYPSYMNNDLISLVAPLIPTPRLHFLMTGYTPLSADHDAPKIRKTTVLDVMQRLLQP
KNMMVSLSPDRANQHCYISILNIIQGEVDPSQVHKSLQRIRERKLACFIPWGPASIQVAL
SRRSPHVTAEHKVSGLLLANHTNISSLFDRCLQQFDKLRKREAFLEVFRKEPMFHESLEE
FDASRGVVDDLVHEYRAAATPDYVHWNPGT