| New model in OGS2.0 | DPOGS203552 |
|---|---|
| Genomic Position | scaffold4393:- 6033-10727 |
| See gene structure | |
| CDS Length | 1527 |
| Paired RNAseq reads | 512 |
| Single RNAseq reads | 1419 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004249 (2e-65) |
| Best Drosophila hit | CG18155 (2e-33) |
| Best Human hit | acyl-CoA synthetase family member 3, mitochondrial precursor (5e-100) |
| Best NR hit (blastp) | PREDICTED: acyl-coenzyme A synthetase ACSM2, mitochondrial-like [Rattus norvegicus] (9e-119) |
| Best NR hit (blastx) | PREDICTED: similar to Acyl-CoA synthetase family member 3, mitochondrial [Acyrthosiphon pisum] (4e-107) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0005739 mitochondrion GO:0006631 fatty acid metabolic process GO:0016878 acid-thiol ligase activity |
| InterPro families | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL16731 |
Nucleotide sequence:
ATGTGTAACAATGATGCGACACACATTATTGTGCAGTGGGCGATATGGATGACGGGCAAC
ATTGCCGTACCTCTAACCCCACTTCATCCTGAGGAGATGTTGAAGTACTTCATAATGGAC
AGTGATTCTAAACTGATCATATGTTCAAATGACTTTGAGAAAGTTTTGAAGCCGATAGCA
AAGGAATTGTCGAAGCCGATCTTACTTTCAAACAGATCGGAAAACTCTGAAGAGAAAAAG
ACTGTGTTACAAGACGTAGACTTAACTAACAAATGGTACGGCGACAATGAGGCCATGCTT
ATCTATACAAGCGGTACAACGAGTAAGCCCAAAGGTGTCGTTTGGAGCCACAGGATGCTA
TCCATCCAGATAGCAGCACTTCACACAGCCTGGAAATACTCCGCCCACGACGTGGTGCTG
CATACATTGCCGCTACATCACATACACGGCCAACTTAATTCGTTGAACGCCACTATGGCG
GCTGGAGCCAGGATCCGTATGCTGCCCAAGTTCACCTCTCACACCGTGTGGGCTAAACTG
TTAGACTCGGACAAGGCCAAGGTGTCAGTGTTCCACGGAGTGCCATCTATGTACAGTAAA
TTAGCGGCTGATTATGATAAAATGTTCAGTGACAGTAAGACGGCAGCGTATGTGAAGAGT
ACACTGTCATCGAGGATGAGACTCATGTGCGCTGGGTCTGCACCCTTACCGGAGAGCCTG
TTCAAGAAGTGGGAAGAGATATCCGGACTAAAGCTATTAGAACGCTATGGTATGTCTGAG
GTTGGTATGGCATTAAGTAACCCCTACAGACCCCTAGAAGGAAGGTTGGTGGGCCGTGTG
GGGGTCCCATTGCCCGGGGTCTCGGCCAGAATCGCAGAATTCAAAGATAACGTGATGGAA
ACCATGGTTGATGTCACCGGGGACATGCCAGATTTACAAATATCTCTTGACAAGCTCGGT
CTCACAGGGAGTCCGTCCATCAAGGAGTTTGATAACGACTGGAAGGTCAATGAAACAAAA
TTAACAGACAGTGATGTGTGTGAAGGGGAGTTATTATTGAAGGGTCCGGCTGTGTTCACT
AGGTATTGGAATCGCGCGCCCAGCGCCTTATCATCAGATTTCACTTCAGACGGGTGGTTC
CGCACTGGCGATATGGCCTCCTTCTCCCAGGGCACCTTCAAGATCATGGGCCGGACATCA
GTAGACATCATTAAGACGGGAGGATACAAAGTCAGCGCCCTACAAGTGGAATCCGCCCTT
CTTGAGCATCCAGACATATCAGATGTAGCCGTATTGGGTATACCTGACCAACATTACGGA
GAGATTGTATCAGCGGTGGTCGCTCTCAAGGAAGGTAGGAGTCTGACCCTGAGAGAGTTG
AAAGATGAAGCTGGCAAGAGACTAGCGCCGTACCAACTGCCAAAAACTATGGTTATAGTG
GATCAGATGCCGAGGAACGCTATGGGCAAACTTGACAAGAAGCTCATCAGACAGCAGTTT
GGTGAGAAGTTGGTGTTTAAACAGTGA
Protein sequence:
MCNNDATHIIVQWAIWMTGNIAVPLTPLHPEEMLKYFIMDSDSKLIICSNDFEKVLKPIA
KELSKPILLSNRSENSEEKKTVLQDVDLTNKWYGDNEAMLIYTSGTTSKPKGVVWSHRML
SIQIAALHTAWKYSAHDVVLHTLPLHHIHGQLNSLNATMAAGARIRMLPKFTSHTVWAKL
LDSDKAKVSVFHGVPSMYSKLAADYDKMFSDSKTAAYVKSTLSSRMRLMCAGSAPLPESL
FKKWEEISGLKLLERYGMSEVGMALSNPYRPLEGRLVGRVGVPLPGVSARIAEFKDNVME
TMVDVTGDMPDLQISLDKLGLTGSPSIKEFDNDWKVNETKLTDSDVCEGELLLKGPAVFT
RYWNRAPSALSSDFTSDGWFRTGDMASFSQGTFKIMGRTSVDIIKTGGYKVSALQVESAL
LEHPDISDVAVLGIPDQHYGEIVSAVVALKEGRSLTLRELKDEAGKRLAPYQLPKTMVIV
DQMPRNAMGKLDKKLIRQQFGEKLVFKQ