| New model in OGS2.0 | DPOGS211635 |
|---|---|
| Genomic Position | scaffold1648:- 68181-69443 |
| See gene structure | |
| CDS Length | 1263 |
| Paired RNAseq reads | 427 |
| Single RNAseq reads | 1114 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011782 (2e-159) |
| Best Drosophila hit | CG8368, isoform A (2e-81) |
| Best Human hit | putative RNA exonuclease NEF-sp isoform 1 (2e-34) |
| Best NR hit (blastp) | PREDICTED: similar to GA21025-PA [Nasonia vitripennis] (1e-97) |
| Best NR hit (blastx) | PREDICTED: similar to GA21025-PA [Nasonia vitripennis] (2e-88) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0004527 exonuclease activity |
| InterPro families | IPR013520 Exonuclease, RNase T/DNA polymerase III IPR006055 Exonuclease IPR012337 Ribonuclease H-like |
| Orthology group | MCL13808 |
Nucleotide sequence:
ATGGCCTTAGTACCACTGTCTGAAAATGAAAAAGAAACTTTAATCCAAAAATATGGAAGC
ATGAATTTAGCTCTTGAGGTGAGAAAGGATTTGATGGTGATGATGAAAGCTGTTTTTCCT
ATCAGAGATGAAATAACAGGTTCGGTAGATGTAAGACGACTTGATGAAAAATTTCCAAGG
ACACAGCTTATGCTCTCAGCATGGCAGCTGATAGATGAAAACTATCCAGTTCCACTTAAA
GGTAAATTACAGAATGTGTACGCTGATTATGTTATGACAAAAGAAGAGTATTCACCAGTT
ACAGCGGAATCACCCATGTTTGGTTTAGATTGTGAAATGTGTCTTACAAAAGCTGGTTCA
GAGTTAACCCGAGTATCAATCGTCAATGAAAAACACGAAACTGTATATGAATCTTTTGTC
AAACCCTACAACCAGATAATGGATTATCTAACTCAGTATTCTGGTATTACTGAGGAGTTA
TTGAGAGATGTAACAAAAAGGCTTGAAGATGTGCAGAAAGAAATACAAGAGCTTCTGCCC
TCTGATGCAATATTGGTCGGACAGTCTCTGAATTCAGATTTACATGCCTTAAGATTAATG
CACCCATATATCATTGACACAAGTTTGATCTACAATTTCACCGGAGAAAGATATCGCAAG
CCGAAGTTAAAAACATTAGCAAAGGAATATCTCAAAGAGGAAATTCAGACCGGCACAGAT
GGTCACTGCTCAGTGGAGGATTCCCTTGCCTCCCTCAAACTTGTTCAGCTGAAATTAAGC
AAGAGTGTCGAATTTGGTGATGCAGTACACACAAAGAGGCAAAAATACAAAGAAGAAGTC
AATAAAATGGTCACCGAACCCCATTATGCTTTGTCCATTTTTAATCACATAATAGAACAG
AAGAAAACCTCAGTAATCATCGGCTGTGACAATATAACAGGCGACTATCATACATTTTTG
ACCCAAGCAAAGGAAAGTTTAAGTACTCAGTTGAAGAAAGGTAAACCTAAGAGAGTTAAA
TTGAACACAGTGGATAGTATGGATGAAGTCATAACAACATTAACAGAATCAGTGAAAAAT
TATAACTTAGTCATGGGACACTTGAAATTGGAGGCGTCCGAAGATGATACAAAGTTAATG
CAAACAGTTGATGGCTGGGTAGAAACTGTGTGGAACAGTATTCAAGAATCAGCTATTTGT
GTTATTGTGTTCGGTGGAACTGTCAACGGTAATGGAGTAGCGATGATGAAGGTGAAAACT
TAA
Protein sequence:
MALVPLSENEKETLIQKYGSMNLALEVRKDLMVMMKAVFPIRDEITGSVDVRRLDEKFPR
TQLMLSAWQLIDENYPVPLKGKLQNVYADYVMTKEEYSPVTAESPMFGLDCEMCLTKAGS
ELTRVSIVNEKHETVYESFVKPYNQIMDYLTQYSGITEELLRDVTKRLEDVQKEIQELLP
SDAILVGQSLNSDLHALRLMHPYIIDTSLIYNFTGERYRKPKLKTLAKEYLKEEIQTGTD
GHCSVEDSLASLKLVQLKLSKSVEFGDAVHTKRQKYKEEVNKMVTEPHYALSIFNHIIEQ
KKTSVIIGCDNITGDYHTFLTQAKESLSTQLKKGKPKRVKLNTVDSMDEVITTLTESVKN
YNLVMGHLKLEASEDDTKLMQTVDGWVETVWNSIQESAICVIVFGGTVNGNGVAMMKVKT