| New model in OGS2.0 | DPOGS210108 |
|---|---|
| Genomic Position | scaffold2351:+ 25855-47451 |
| See gene structure | |
| CDS Length | 1272 |
| Paired RNAseq reads | 855 |
| Single RNAseq reads | 2189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000217 (2e-107) |
| Best Drosophila hit | CG34104, isoform B (3e-39) |
| Best Human hit | rho-related GTP-binding protein RhoU (1e-35) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP003932-PA [Tribolium castaneum] (3e-51) |
| Best NR hit (blastx) | AGAP003932-PA [Anopheles gambiae str. PEST] (3e-39) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0005525 GTP binding GO:0005622 intracellular GO:0007264 small GTPase mediated signal transduction |
| InterPro families | IPR003578 Small GTPase, Rho type IPR001806 Ras GTPase IPR013753 Ras IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR005225 Small GTP-binding protein |
| Orthology group | MCL18833 |
Nucleotide sequence:
ATGTCTCCTAGCTTAGAGGGTATCATGTTTAACAGGAACGCGAACCTGTCAGCTCGCCGG
CCATTGCTCGCGGAACCACAGAAGCCAGTCGTGGTTCCACCTCGAGCACCACCCCGTGAC
TATGGTAAGTACGGTAGACCTGTGCCAGCGGCGAGGAACCCTTCAGCCGACGAAGGACGA
TTCGAATACAGATCCGATTATTGGAAACCGTCAAATGTTGACATCGAAAAACGGCTGCAG
GAGACGAGAACACGAGAGAAGATCGGATACTTTCAAGACAAAGTGACCCCACCGGAATTA
AACTTGGATCGTAGGGAAGCGGAATTAGTGTTTAAATTCGACCCTCACGCATCCGCTGAA
TATTTATCGAGTCAGTATCAAGCTCCAACAGTTCAATATGCAAAGCCCCCGACGCCGGCA
AACGGGTTTGCTAACCGTCTACCGGAGAGAGATGGTCCTTTTGTATTCGGAGTGCACAGT
CCCAGTCAGTTCCCTATACCGCGTCGGGACGAAGACGACTACGACTACTCCGAGGTGGCC
GAGGAGCACGGCCGTCCAGTGATACGAGACGACGAATCTACGGAACTCAATTGTTGTGAT
AAAGTGAATGAGTGGACGGTTAGGGATAAGAAGAGTCGGAGGACTTTAAATCGTATGTTC
CAAATAAAGGATCGACGGAAAGTTAAAGGTGGGAAGAAAGAAAAGATTAAGTGTGTGTTG
GTGGGAGATGGAGCGGTGGGAAAGAGTTCCTTAATAGCTGCGTACGCCCAGGACACCTTT
CGGGAAGAATATCAGCCGACCGCATACGACACATTTAATGTTGTGGTTGACGTTGATGAC
AGGCCGGTCTGTGTGGAAATCTGTGATACTGCGGGTCAGGACTCAATGTCCGAGCTCCGC
GAGCTGTGCTATCCCGGTACCGATGTCCTGATGCTCTGTTTCTCCGTGGTTCGTCCGGAG
ACGTTCAAGTCAGTCGCCGATCGCTGGATCCGCGCCGTGTCCTCGGTGCAGGCTCCAGTA
GTGCTCGTGGGGACGCAGAGCGACCTGGCCCTGGACGGACGTGTGATACAGACTTTACGG
GCCCGCAACGAACACGCGGTAACAGAAGCTGAAGCGAGAGCATTGGCGGCAAAAATAAAC
GCCACGTACATAGAGACGTCAGCTAAGACACGGAAACAGCTGAAGGACGCCTTCGACGCC
GCCATCTTGGCAGGGCTTCCAGTTGTACAGAACAAACGACCGCTATGGAAGAAATTATTA
TGCCTTAACTAG
Protein sequence:
MSPSLEGIMFNRNANLSARRPLLAEPQKPVVVPPRAPPRDYGKYGRPVPAARNPSADEGR
FEYRSDYWKPSNVDIEKRLQETRTREKIGYFQDKVTPPELNLDRREAELVFKFDPHASAE
YLSSQYQAPTVQYAKPPTPANGFANRLPERDGPFVFGVHSPSQFPIPRRDEDDYDYSEVA
EEHGRPVIRDDESTELNCCDKVNEWTVRDKKSRRTLNRMFQIKDRRKVKGGKKEKIKCVL
VGDGAVGKSSLIAAYAQDTFREEYQPTAYDTFNVVVDVDDRPVCVEICDTAGQDSMSELR
ELCYPGTDVLMLCFSVVRPETFKSVADRWIRAVSSVQAPVVLVGTQSDLALDGRVIQTLR
ARNEHAVTEAEARALAAKINATYIETSAKTRKQLKDAFDAAILAGLPVVQNKRPLWKKLL
CLN