| New model in OGS2.0 | DPOGS211911 |
|---|---|
| Genomic Position | scaffold4014:- 2803-6975 |
| See gene structure | |
| CDS Length | 966 |
| Paired RNAseq reads | 1045 |
| Single RNAseq reads | 3648 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001107 (1e-140) |
| Best Drosophila hit | supercoiling factor, isoform C (2e-95) |
| Best Human hit | calumenin isoform c precurosr (3e-82) |
| Best NR hit (blastp) | DNA supercoiling factor [Bombyx mori] (1e-149) |
| Best NR hit (blastx) | DNA supercoiling factor [Bombyx mori] (2e-153) |
| GeneOntology terms | GO:0003916 DNA topoisomerase activity GO:0005509 calcium ion binding GO:0006325 chromatin organization GO:0009047 dosage compensation, by hyperactivation of X chromosome GO:0005700 polytene chromosome GO:0045941 positive regulation of transcription |
| InterPro families | IPR018249 EF-HAND 2 IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain |
| Orthology group | MCL13597 |
Nucleotide sequence:
ATGTTAATAACATTGTACACAGTTCTTGCCATAACAGCGGTATTTGCTGGTGTTCCCAAC
CAGGATGAGTCTAAGCGGATGATGGACCACTTGTCGGATGCTGAACATTATAGAAATGAG
CATCACAACAAACAATTTGACCATGACGCATTCCTCGGGGAAGATCAAGCTAAAACATTT
GATCAATTGTCGCCTGAAGAAAGCAAGAGAAGACTAGGAATCATCGTCGACAAGATAGAT
TCTGACAGTGACGGATTTGTTTCGCTCGTTGAGTTGAAGGATTGGATTCGTTACACGCAG
AAGAGGTACATCGAGGAGGACGTGGAAAGACACTGGAAGCAGCACAGCCCTAATCATGAC
GACCTTATTCCTTGGGAGACATACAAGAAGAATGTGTACGGCTTCATGGAAGATATGACA
AATAATGAGTTGAGGAATGCCGAGGGTGCGACCTACACCAACCTGATGAAGAGAGACAGA
CGCAGGTGGCATTATGCTGACGGTGATCAAGATGATGCTCTGAACCGCACCGAATTCGGC
TGGTTCCTTCACCCCGAGGACCACTCCGGCATGAGAGACGTGGTCGTTCTGGAGACTATG
GAAGACATAGACAAGGATAAGGACGGTAAGGTGTCCCTGGAGGAGTACATCGGTGACATG
TACAAGCCGGAGGAGGGAGACGTGGCCGAGGACGAGCCGGACTGGGTCAAGCAGGAGAGG
GAACAGTTCACGGGATACAGAGACACAAACAAAGATGGTTACATGGACGAGCGCGAGGTG
AAAGAATGGATCGCGCCGCCCGAATTCGACCACGCGGAGGCCGAGGCGAGGCATCTCGTG
TTCGAAGCGGACTCGGACGCCGACGAGAAGCTGACCAAAGACGAGATACTGGACAAGTAC
GACCTGTTCGTCGGATCACAGGCGACCGACTTCGGCGAGGCCCTGGCCAGGCACGACGAG
TTCTAG
Protein sequence:
MLITLYTVLAITAVFAGVPNQDESKRMMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTF
DQLSPEESKRRLGIIVDKIDSDSDGFVSLVELKDWIRYTQKRYIEEDVERHWKQHSPNHD
DLIPWETYKKNVYGFMEDMTNNELRNAEGATYTNLMKRDRRRWHYADGDQDDALNRTEFG
WFLHPEDHSGMRDVVVLETMEDIDKDKDGKVSLEEYIGDMYKPEEGDVAEDEPDWVKQER
EQFTGYRDTNKDGYMDEREVKEWIAPPEFDHAEAEARHLVFEADSDADEKLTKDEILDKY
DLFVGSQATDFGEALARHDEF