New model in OGS2.0 | DPOGS213775  |
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Genomic Position | scaffold4992:- 5513-6882 |
See gene structure | |
CDS Length | 408 |
Paired RNAseq reads   | 23 |
Single RNAseq reads   | 650 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007159 (7e-23) |
Best Drosophila hit   | lethal (1) G0156, isoform B (1e-13) |
Best Human hit | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial precursor (6e-10) |
Best NR hit (blastp)   | GJ15838 [Drosophila virilis] (8e-14) |
Best NR hit (blastx)   | GJ15838 [Drosophila virilis] (4e-13) |
GeneOntology terms    | GO:0005759 mitochondrial matrix GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
InterPro families   | IPR001804 Isocitrate/isopropylmalate dehydrogenase |
Orthology group | MCL20831 |
Nucleotide sequence:
ATGTCGAAGAATTACATAAATGCTCTTTTGAAGCCTTTTCGTGAGAATAAAGTTGTATCA
AGTATACTAAAATTATTCGAGTCGGGCTCAAATAATCCTTCGGGAGGGGTTGTGGGTGTG
AAAAATGAGATCCCCGCGGGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAG
GTGACACTCATCCCTGGACACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATA
TTCGAAGCCGCCAAAGTACCCATTGAATGGGACGAGGTGGACGTGACAGCTTACCGTGAG
AAGAAAGTGTTTCATATTTGTACTGGACTGATAACATACACCTGTACAAAGAAGAAAAAT
CTAGAGAGCGGTAAACTCCTAAAGAAAAATCAATTCAGATACAATTAG
Protein sequence:
MSKNYINALLKPFRENKVVSSILKLFESGSNNPSGGVVGVKNEIPAGRAGSAQYSTGVRK
VTLIPGHGIGPEITVAVQKIFEAAKVPIEWDEVDVTAYREKKVFHICTGLITYTCTKKKN
LESGKLLKKNQFRYN