| New model in OGS2.0 | DPOGS214094 |
|---|---|
| Genomic Position | scaffold185:+ 75829-91015 |
| See gene structure | |
| CDS Length | 1308 |
| Paired RNAseq reads | 1869 |
| Single RNAseq reads | 4384 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006151 (3e-25) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Integrin beta pat-3 precursor [Brugia malayi] (2e-09) |
| Best NR hit (blastx) | Integrin beta pat-3 precursor [Brugia malayi] (2e-12) |
| GeneOntology terms | ND |
| InterPro families | IPR014836 Integrin beta subunit, cytoplasmic |
| Orthology group | MCL40037 |
Nucleotide sequence:
ATGGCGTCTGTGTGGTTCACGGTGACAGTTCTTGTCTGTATAAATCAAGTATTAGCAAGT
TACCGCGATTGCTCGAATTTGGATAATATTAAAAATTGCAATGAATGCATCCGTTGCGGA
GCACATTGGTGCAATAATCCACATGAGAACCGTCGCTGTTCGTTGGAGCGTTTCGACAAC
TGGTGTCCCAATCATCAAGAGAGCTTGCCGTACCTCACTGAAATCAGTGAAAAGGGAAAG
ATCTTAAATCCCAAGTACAGAGTCCAAACTATCCACGTGGGTCAAGAAGATGAGATTGAC
ATCGTATACCAGTATAAAGCTGGTGAACCGAAGGTCAACTTCGTCGCAAACTCGACGCAA
AAATCGAATTTCATCATCAGTAAATCCACGAGCTGTGCGTCTGGCTCGTGTACAACGACA
CTGAACACAATACCGGAGACGGACTTCTGCGAGAATACTGGAAGTACGAACGAGTTCTTT
AACGTCAAACTGACGGTTAGCGATGTCGAGGAGGAAGCCGTTCTGAAGTTCCATGTACCT
TGTGCTTGTGGTTGCACTGAAAAGGTTGAAAAACTGTCCCCTACTTGCAATGGCCGGGGT
GACCTCTCGTGCGGCGTGTGCACATGTCAAGACAAATGGTCGGGCACTTTCTGTGATCAA
CCAATTTGTGATGAAAAACGCGGGGACGTACCATGTATAGATTCATCGAGGAGCAGTGTC
GAATGTTTCGGGAACGGAGTTTGCGGTCGTTGCGACAAATGCGAGTGTTTCACAAACAGA
CCCGGCTCTAGGTACTTTGACAGGAACGATTACTGCATAGACATCTGTACCAAAACAAAT
GAATGCGACGAATGCCTTATAAAACCACATCTAGGGAAATGCCACGAATGCCATTTTCCA
CTACACAAACAGAGCTACAATGAATCATTGACGAGCGCTAAAGACGAATATGGGCGACAC
ATGTGGATAAAATGCAACGATACTATCAATGATTGTAACATTGAATATGTTGTGATGAGA
GACGATAGAGGGGAATCTTACTTCATGGTGACCAAGAACTGTGATCCCAAACAGGAGGGC
CAGGAGAGCGCTAAAGTTAACCTAACAGTGCCGATTCTGCTCGGTCTGGTGGCTGTGCTA
GCTGCAGCTAGTGCTGTCGGCTACTTCGTGTACAAAAGTCGTCCGCCGCCCGTACCGCTC
ACAGACCCAATGTACACCAACATTGGAGCTGAAGACTGCACCGGAGAGAACCCCCTGTAT
AAGCCGCCCACGTCCTCCTTCAAGAATCCCACGTACGGCAAGTGGTAG
Protein sequence:
MASVWFTVTVLVCINQVLASYRDCSNLDNIKNCNECIRCGAHWCNNPHENRRCSLERFDN
WCPNHQESLPYLTEISEKGKILNPKYRVQTIHVGQEDEIDIVYQYKAGEPKVNFVANSTQ
KSNFIISKSTSCASGSCTTTLNTIPETDFCENTGSTNEFFNVKLTVSDVEEEAVLKFHVP
CACGCTEKVEKLSPTCNGRGDLSCGVCTCQDKWSGTFCDQPICDEKRGDVPCIDSSRSSV
ECFGNGVCGRCDKCECFTNRPGSRYFDRNDYCIDICTKTNECDECLIKPHLGKCHECHFP
LHKQSYNESLTSAKDEYGRHMWIKCNDTINDCNIEYVVMRDDRGESYFMVTKNCDPKQEG
QESAKVNLTVPILLGLVAVLAAASAVGYFVYKSRPPPVPLTDPMYTNIGAEDCTGENPLY
KPPTSSFKNPTYGKW