| New model in OGS2.0 | DPOGS200010 |
|---|---|
| Genomic Position | scaffold2214:+ 14924-18765 |
| See gene structure | |
| CDS Length | 1299 |
| Paired RNAseq reads | 307 |
| Single RNAseq reads | 708 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009708 (2e-119) |
| Best Drosophila hit | origin recognition complex subunit 4 (5e-75) |
| Best Human hit | origin recognition complex subunit 4 isoform 1 (1e-62) |
| Best NR hit (blastp) | origin recognition complex subunit 4 [Bombyx mori] (1e-166) |
| Best NR hit (blastx) | origin recognition complex subunit 4 [Bombyx mori] (1e-149) |
| GeneOntology terms | GO:0005664 nuclear origin of replication recognition complex GO:0006270 DNA-dependent DNA replication initiation GO:0005524 ATP binding GO:0017111 nucleoside-triphosphatase activity GO:0003677 DNA binding |
| InterPro families | IPR016527 Origin recognition complex, subunit 4 IPR003959 ATPase, AAA-type, core |
| Orthology group | MCL12224 |
Nucleotide sequence:
ATGCACGGAGAATCACATTCAGCGCTTATTATCGGCCCTCGAGGGTGTGGGAAGACAACA
CTTCTTAACTCGGTGCTGCACCAAGTCTCCCACGAAGCTGATGTACAGAATGATGGTCTC
ATCATCAAACTCAACGGTTTGATACACGGTGATGAAAAGATTGCTCTGAAATCTATAACT
GCTCAGATGCAATTAGAAAATGCGGTCGGTGATCATATATTTGGCACATTCGCTGAGAAC
CTCAGCTTCCTACTGAGCTGTTTGAAAACCGGTTCCGATCGTACATGTAAAAGCATGATC
TTCATTTTGGAAGAGTTTGATCTGTTCTGTCACAGCGGTCGCACACAGACACTGCTGTAC
AACTTATTTGATATCACTCACAGCAAGCAAGCGCCGATGTGCGTTTTGGGTGTGACCAAC
CGTATGGATGTTATGGAATTGTTGGAGAAGAGAGTGAAGTCTCGTTTCTCCCATCGTCAC
ATATTCATGTTCCCCAACGAATGCTCGGATCCTTTGACGTCGTGTAAGAGGCTGTTCGTT
GATACCATGAGCTTGCCAACCAGCCTGGGTAAACGGAGAAAAGATAAAAGAAAAAGAAAG
AAATCTGAATCTATACAGGGGGACGTACAAACAGACGGATATGCAGTGCCGATAGAGGTA
GTCAAGAGGTGCAGCATGGAATTGACGGACTTTGAAATAGATTCAACATTCATAGAGGAG
TGGAACACACACATACAGGAGCTGGCTGAGAACGATAAGTTTAGTGATGTTTTGGAGAAA
TTTAGCTATTATACGGTCAACGAACAGATATACAGGAATGTTTTGTATCAGATAATATCA
AAACTATCACCGGCGAAACCTTATATCGATGTGAGTGATGTGTCATCGTGTGTAGATGGA
ATGGTGTCTCCGGAGCACTCGGTGAAGCTGCTGCAATCCCTGTCCATACTGGAGCTGTCC
CTGGTGATAGCCATGATGCATGCTATGGAGATATTTGATGGGCAACCCATGAATTTTGAG
ATGGTTTTACACAGATACAGCAAGTTCGCCAACACTCACTCATCAGCGCAGGCGGTGCCG
CGGCCGGTGATACTCAAAGCTTTCGAACACCTGCACCAGCTGGAGATAATAGTTCCTATC
AGGACGGACGGCGCGGGCGACGCCAGCACCAGCAGGGTGCAGAAGGAGTACAAGCTATAC
ACTCTGGGAATCCCCGTCGAGGACATCAAGGAGGCTGTCAAAGGGTTCAAGGCTCTACCC
ACCGAGATCAGCCACTGGTTCAATAGTTCGGTCATGTGA
Protein sequence:
MHGESHSALIIGPRGCGKTTLLNSVLHQVSHEADVQNDGLIIKLNGLIHGDEKIALKSIT
AQMQLENAVGDHIFGTFAENLSFLLSCLKTGSDRTCKSMIFILEEFDLFCHSGRTQTLLY
NLFDITHSKQAPMCVLGVTNRMDVMELLEKRVKSRFSHRHIFMFPNECSDPLTSCKRLFV
DTMSLPTSLGKRRKDKRKRKKSESIQGDVQTDGYAVPIEVVKRCSMELTDFEIDSTFIEE
WNTHIQELAENDKFSDVLEKFSYYTVNEQIYRNVLYQIISKLSPAKPYIDVSDVSSCVDG
MVSPEHSVKLLQSLSILELSLVIAMMHAMEIFDGQPMNFEMVLHRYSKFANTHSSAQAVP
RPVILKAFEHLHQLEIIVPIRTDGAGDASTSRVQKEYKLYTLGIPVEDIKEAVKGFKALP
TEISHWFNSSVM