| New model in OGS2.0 | DPOGS209706 |
|---|---|
| Genomic Position | scaffold642:- 23070-33771 |
| See gene structure | |
| CDS Length | 1668 |
| Paired RNAseq reads | 292 |
| Single RNAseq reads | 821 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008918 (2e-141) |
| Best Drosophila hit | CG7998 (6e-28) |
| Best Human hit | malate dehydrogenase, mitochondrial precursor (2e-28) |
| Best NR hit (blastp) | malate dehydrogenase, putative [Ixodes scapularis] (2e-35) |
| Best NR hit (blastx) | putative malate dehydrogenase mitochondrial variant 1 [Taeniopygia guttata] (6e-30) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0046554 malate dehydrogenase (NADP+) activity GO:0030060 L-malate dehydrogenase activity GO:0055114 oxidation reduction GO:0006107 oxaloacetate metabolic process GO:0016491 oxidoreductase activity GO:0006734 NADH metabolic process GO:0043621 protein self-association GO:0005759 mitochondrial matrix GO:0006099 tricarboxylic acid cycle GO:0006108 malate metabolic process GO:0006096 glycolysis GO:0005743 mitochondrial inner membrane GO:0044262 cellular carbohydrate metabolic process |
| InterPro families | IPR010097 Malate dehydrogenase, type 1 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR016040 NAD(P)-binding domain IPR001236 Lactate/malate dehydrogenase, N-terminal IPR022383 Lactate/malate dehydrogenase, C-terminal |
| Orthology group | MCL31176 |
Nucleotide sequence:
ATGCCTCAGCGCTCGTCATCCTCAAGTCTGATGCGACCCTTCGTGGTGTTGGCTCTACCC
GGAATGTATCTGCTGTATAAGTACAATCAGTACCGACAGCAGCAAATGGAGACCGCTCGT
CGACGTGTCACCGAGCGAGAGCTTATGCACCTCAACACCAAAATTAAAAGGGATGATGGT
TGCCGAAGAGCCTGTGCCGATATTCCGCCTGAAAGAGACCCTGTTTGTCCCATTCCGTGT
GATAGAAGGGGCACAAAGAAAGAAGGCATCCTGCACAGGATCAAACTGAGGTTAATAGAT
GGTGGAACGAACTTCGGGACGCCCTTTCGTTACCTCCAAGACGACAAGTATGTCTGTAAA
GAAATCGAGGTTCCGGAACCGAAGGCGTTACCTGCGCCCGTTGAGGAGAAGCCTTGCATA
CAGGAGACTCGGTCCGGGGTGCAAGTGGCGGTGCTCGGGGCGGACACGAGTATAGGACAA
TATGTTTCACTGTTGTTGAAGCAGTGTCCTTGTATAAAGAAATTACGTTTGTACGAAGCG
AGGGATACAAGTACAGGATGTAGTCGTGAGCTTTGTCAAGTTGTTCATGACTTGCAGCAT
ATTGATACCAATTGTCTGGTGCAGGCGTATAGCTGTGCGTGTCATGATTTGGATAGATGC
TTACAGAATTCTGATATTGTCTTGATGCTAGAAAGCGGCTACCTAAGTATGGATATGCCT
ATGGAAACTAGATTCAACTATCAAGCACCAATAGTAAAGAAATATGCTGATGCTATCGCC
AAAGAATGTCCAAATGCATTTATCTTAGTCTGCGCCTCGCCTATAGACTGCATGGTGCCT
TTGGTTGCTGAGACGTTAAAGGAGACCGGTTGGTACAATCCTCGTAAACTACTAGGATCT
TTGGCGGTTCCTGAGATGAGAGCCAGTACTCTTGCAGCAAGAGCGCTGAGCTTGGAGCCA
TGTTATGTAAATGTACCATGTGTTGGTGGCACTGAAGGAGATGCCTTAGTGCCACTTTTC
TCAAAAGCCTTAGAATATTTCGAATTCAGTGAGCAAAACGCTGAAATGATGACGAATACA
GTTCGATGCGCTCCAGAAGCCGTGGCCAAGTCTGATTGCAATTGTGTTAGATCTGCTGAG
CTCAGTGAGGCGCACGCACTCGCCGGCTTGGTCACTAAAGTGGCTTGGGCTTTGCTGTGC
AGAGATGTGCCGCAGATGTCTGGCTTTGTTGAGACTGATCCGTGTCAAATTATCTCTCCA
GCGAGATATATCGCCAATGTTGTGGAGATAACTGGAACAGGGATCATAAGAAGCGTTGGT
CTTCCTAAAATAACGGATTCTGAGATAAGACGCGTGGATATAGCATTGAACGAACTTTAT
AGGAAACAAAAAATGACTATGGACTGGTTTCTTGGCGTTAACGTGTTACTGAACAACCAT
GGTATCTGTAAAATAGTCGACTTACCAGGAAACTTCAGCCCGTTAGAATTACATCTCATG
GACTACGCTGTTATGAATCTCAAATACAACGAGGATTTAGCAATGAACTGGTACTGCGAT
TATATGCATGCGGAATGTCAATTGGGAATGATGGGAACGAAAACTCAATTCTTCGACACG
AAAACAAAGTATCCAAGGGTGCTAGAATGCATAAAAGATATGGCGTAA
Protein sequence:
MPQRSSSSSLMRPFVVLALPGMYLLYKYNQYRQQQMETARRRVTERELMHLNTKIKRDDG
CRRACADIPPERDPVCPIPCDRRGTKKEGILHRIKLRLIDGGTNFGTPFRYLQDDKYVCK
EIEVPEPKALPAPVEEKPCIQETRSGVQVAVLGADTSIGQYVSLLLKQCPCIKKLRLYEA
RDTSTGCSRELCQVVHDLQHIDTNCLVQAYSCACHDLDRCLQNSDIVLMLESGYLSMDMP
METRFNYQAPIVKKYADAIAKECPNAFILVCASPIDCMVPLVAETLKETGWYNPRKLLGS
LAVPEMRASTLAARALSLEPCYVNVPCVGGTEGDALVPLFSKALEYFEFSEQNAEMMTNT
VRCAPEAVAKSDCNCVRSAELSEAHALAGLVTKVAWALLCRDVPQMSGFVETDPCQIISP
ARYIANVVEITGTGIIRSVGLPKITDSEIRRVDIALNELYRKQKMTMDWFLGVNVLLNNH
GICKIVDLPGNFSPLELHLMDYAVMNLKYNEDLAMNWYCDYMHAECQLGMMGTKTQFFDT
KTKYPRVLECIKDMA