| New model in OGS2.0 | DPOGS201391 |
|---|---|
| Genomic Position | scaffold13:+ 458046-464106 |
| See gene structure | |
| CDS Length | 1482 |
| Paired RNAseq reads | 367 |
| Single RNAseq reads | 982 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001990 (6e-115) |
| Best Drosophila hit | RhoGAP68F (8e-81) |
| Best Human hit | rho GTPase-activating protein 1 (7e-84) |
| Best NR hit (blastp) | PREDICTED: similar to rho/rac/cdc gtpase-activating protein [Nasonia vitripennis] (1e-155) |
| Best NR hit (blastx) | PREDICTED: similar to rho/rac/cdc gtpase-activating protein [Nasonia vitripennis] (4e-143) |
| GeneOntology terms | GO:0001726 ruffle GO:0005100 Rho GTPase activator activity GO:0005515 protein binding GO:0005622 intracellular GO:0005813 centrosome GO:0005886 plasma membrane GO:0007165 signal transduction GO:0007264 small GTPase mediated signal transduction GO:0030675 Rac GTPase activator activity GO:0031252 cell leading edge GO:0043087 regulation of GTPase activity GO:0043231 intracellular membrane-bounded organelle |
| InterPro families | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein |
| Orthology group | MCL13463 |
Nucleotide sequence:
ATGGAATCGGAACATCAACCTAAATTGAGTCCAATAAGGGCGTACCAAGTTCTTCTTGCA
AACACAATGGAACCTGAAGATACATACACAAGTCTTTCTGAGTATCATGATTATGAACCT
AGTTTAGAATTCGATGATTCTGAATTGATACAGGCTTCAGGATTGGCACCGTTGCCACCT
GAACTGCTCGACATACCCGACGATCTCCTGGAGCGGTCGGCTAGCGACGGAACTATTGAA
GAGAATTTTGAAAAGGAACTCGCCAAACCACCTCAAGTATACGCTGAGATAGCTGCCTCA
TCGTTAGACGGCGATTGCTGCTGTGAACTTTCTGGCACTGGTTTAGTCGAGGTGGTGGGC
GATGACGAAGTAGGCCGCCGCATCATCGTGGTGTCAGCTTGCCGTCTTCCCCCCAGTAAA
GACCTGCATCCAGACGATCTCCTAAGGTACCTAGTGTGTACTTTGGATAAATATGTGGAG
CAAGATTATAGTGTTGTGTATTTTCATTATGGTCTAACAAGCAAGAACAAGCCACCTCTC
TCTTGGCTATGGAAAGCTTACAAAGCTTTCGAAAGAAAATACAAGAAAAATCTTAAAGCA
CTATATTTAGTGCATCCTACAAATTTCATACGCATTGTCTGGCAAATGCTTAAACCAGCA
ATAAGCGTGAAATTTGGCAGAAAGATGATGTATGTAAACTATTTACATGAATTACAACAA
TATTTAGATTTGGATAAACTTTGCATTCCCGAACAAGTTCTAGAGTACGACAAGTTACTG
CTGTCGAAGAATCCGCGAGTTGCTGAGATGGCGCGTCAGAAAGCCGAGCGTTCCGCGATG
AGCCAAGACGAAGCCCGAGCTTTACCCGAACCGAGCTCGTCTGCCCCGAAAACACAGCAG
TTCGGGGTTTCTCTGCAATTCATTAGAGAAAACAATTCTAACATGGTCGACTCCATACCA
CCTATCGTGAGGGATTGCGTCGAGTTTCTCTCTAGGCCCGAGATTTTGGAGACGGAGGGT
CTCTTCAGGCGATCAGCGAACATCGTGGCTGTGAAAGAGATTCAAAGCGCGTGCAACAGG
GGGGAACCTGTTTGCTTCAGAGACGATCCCACTAACGCTGCGGTATTACTGAAGACCTTT
CTCCGTGACCTGGAGGAACCTCTGCTGACCTTTGACCTCTACGATGATATCGTACAATTT
CTTTCATGGCCGAATAGAGACAAGCCGCGTCTGGTGAAGGTTATGATCCTTGAGAGGCTG
CCGCTTGAGAACTATAAGCTCTTGAAGTACATCTTCCAGTTCCTGTGGAAGGTTCAAGAT
AGAAGCTGCGTGAACAAGATGACGAGCAGCAATTTGGCGGTTGTCTTCGGACCGAATCTC
TGCAGGGCGCCATCTGGTGTGATGTCACTGTCAGCTATCGCACCCATAAACGCATTCACC
GATTTCCTCCTAGAGAACCAGGAATCCATCTTCATTATATAA
Protein sequence:
MESEHQPKLSPIRAYQVLLANTMEPEDTYTSLSEYHDYEPSLEFDDSELIQASGLAPLPP
ELLDIPDDLLERSASDGTIEENFEKELAKPPQVYAEIAASSLDGDCCCELSGTGLVEVVG
DDEVGRRIIVVSACRLPPSKDLHPDDLLRYLVCTLDKYVEQDYSVVYFHYGLTSKNKPPL
SWLWKAYKAFERKYKKNLKALYLVHPTNFIRIVWQMLKPAISVKFGRKMMYVNYLHELQQ
YLDLDKLCIPEQVLEYDKLLLSKNPRVAEMARQKAERSAMSQDEARALPEPSSSAPKTQQ
FGVSLQFIRENNSNMVDSIPPIVRDCVEFLSRPEILETEGLFRRSANIVAVKEIQSACNR
GEPVCFRDDPTNAAVLLKTFLRDLEEPLLTFDLYDDIVQFLSWPNRDKPRLVKVMILERL
PLENYKLLKYIFQFLWKVQDRSCVNKMTSSNLAVVFGPNLCRAPSGVMSLSAIAPINAFT
DFLLENQESIFII