| New model in OGS2.0 | DPOGS203720 |
|---|---|
| Genomic Position | scaffold510:+ 74970-78336 |
| See gene structure | |
| CDS Length | 3090 |
| Paired RNAseq reads | 227 |
| Single RNAseq reads | 673 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003506 (0.0) |
| Best Drosophila hit | arc, isoform B (5e-27) |
| Best Human hit | PDZ domain-containing protein 2 (1e-16) |
| Best NR hit (blastp) | PREDICTED: similar to PDZ domain containing 3 [Apis mellifera] (2e-42) |
| Best NR hit (blastx) | PREDICTED: similar to PDZ domain containing 3 [Apis mellifera] (6e-45) |
| GeneOntology terms | GO:0005912 adherens junction GO:0048749 compound eye development GO:0016324 apical plasma membrane GO:0005515 protein binding |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | MCL39321 |
Nucleotide sequence:
ATGGTCATGGAGGACGATGCCAATGATATGAAAAAAGTGTTTGCTACGTGGGGTCGCCGA
ATGGGGAGGAAACTAGATTTATTAAAAAAGAATGAATCTAAAGAGATGCCTGAAGAACCA
GGTACACACGAATCTGTAAGCAACGATTCTTCTATAGTTTTAACTGGACAGTATAAAAAG
AAACAAAACTGGAAAATGGGAAGAAGTACATCAGACTCATCATCTCTAAAAAGAGACAGT
GATACAGAATCAATACGCAGCGGATCCAGAGATAGGTCACCAAGCCCTTTTAAATCTTTT
TTTCATAGAATGGGTTCAACGGGTATGTTAAATAGTTCTAAAACACAGTCTTTAAATTCT
CCGAACCCACCAAACAGCTATTCTTTATCCAATGGTCCCGCTCTCTATAGAAGTTGTTCG
ACCTCACACTTATCGACATACGTAAAAGCTGATGACCCATCTGACGATATAGATTTACAA
AATACTGGAGCCGAAACTAAAAATTCTCCTACAAAACAAAAGAACGCTAATCTTTTGACC
GAAGACAATTTTGTATCTTCATCTACTAAAGCTATCAGTTGTGATAATATTCCAAATAAA
TTGGAAGCCCCACAAAATACGGGCACTTGCAAAAAACCTAACTTTCCATATGCTTTTTTA
AGATCTAAATTATCAGTTTTACCAGAGGAAAATAGCTTGGCTTCACACCGCTCTGTTTCT
GTCAGACAAAGCTTTTCCGAAAGGATAGATCGAAAATCTCCTAAATTTCGAAAAGAAAGG
TTATACCTGTCAAACTCCCGATCAGAAGAACGATATCAAAGTAGCGATAACATATCCGTC
CACGATGAAAGTATACTTATAAATTCAGGTCTGAGAAACTGCAACGACTTTGCGAGAAGT
TCTATAAGAAGCATAAACGAGACTGATGTCTACCAAAATAAACATGTTGATGATGTACTT
AGGAGATCATCTATGATATCTCACAAAGCACCAATTGATTATGACCCTATGTTAATTCCT
CGAAATAGAAATAGCCTGCCAGTTTATGAGTACAGATCTACTATAGGTTCTGCACATGAT
CTTAAAGGTGACCTTGCTTCTTCTAATCAAAGCATTCATCAAGAAGTACTTCAAGCACAT
CGCCTCAGTAGCTATGTTAGTTCTAACGAATCTGGATATGACAGTGATGGAAGACCAACA
GATGAGCACAGTAACCATTCACCTCCAGGTTATGGCAATAATATGGGAGGAATATCAATT
ACAATGAATGGGGAACATAATCTTGGTAACTTTTCACGACAATTAAGTTTAAATCACAAG
ATTAATGTCAACAAAGTTCAAGTACCCATGCGTAGAAGTTCTACTCCGTGTGCTTTATTT
CCCATTGAAAAAAAGTCATACTATGAGTACGAAAATGAAAATAGAGATGACAATCAATAT
CAAAATAACGATTCAAATCTTATCATCATCGATTATAATGATGGAAAACCACCGCCACTG
CCAAAGAAAACAGTCCATAAAAAGACACCATATATTTATAAAACCATCACTTTAGATGAA
CGTGTTCAAACAAGAAAAATAAAATTGCTACAGTCACAATTAGTTTCTGTTGATCACTCG
TCTACGCCGAATCTCAGTGATAACTCTTTAAATACTTCTAAGGAATTGAACAATGTACAA
AGAATTCATGAGACAGATATACTTGGAAGGGGTCCATGTACAAAACGATTTAGAAAAATA
AGACTACTAAAATCAAGATTGGATGAAAGTTTGGGTGTTTATTTGGCACAAAATAGAGTG
GATTTTGATAAAAGTGGAAATAATTATGAAATCCGTTATATAATTGTTAAACTTGATTTT
GATGGAATTGCTCACCGAGATGGGCGACTCAGAATAGGTGATGAGATCGTTAACGTAAAT
GGGAAAGTCTTAAGAGGACTTTCTTCGCTCAGAGACGTACAACATATAGTAAATTCTTGC
TCTACTGAAGCAACAATCGAGGACAGTGGTCTTTTTCAGAGGTATCAAGTTGATCTGGTC
ATGGCACATGATGAAATATCTCCCATTACCTTAAGTCGTATTATTAATAATAAATCTAGT
GAACCCAGTTCTGTACACTCCTCTTCAAGTATTCCTCCTGATATTATTGCACAAACCCAC
AAACCATCACCCCCAAATCAGATGGTAATTGAAACTCATTTTCCAAGCACTGACAGCACA
TTAAATTTACGTAATAGCAATAATACCAGTGGATATGTGAATGATATGCCAGAAAAGAAT
CAAAAGTGTGAAGTCGGTATACAGGTCAACAATAATCTATTGCTTTCTAACCAAAAAAGT
GACGACGAAAAATTGTTGGAGCGAAACTATTATACACAATCCCATTCATCTCTACAAAAT
ATAACTAATATAGAAATTTCAATGAGATCATCGCCTACACCGAGACACGGCACCAATAGT
TCATATCGTCCCATATCATTTCACAGCACTCGTCCTCAACATTTATGTGGAACAACACTG
TGTAACGATAATACTACCAACGATATCAAAGAAAATTCTTCTCATTATATAAAGAACGTT
CATAGGACATACCAAAATAGGTCTTATGAAAGTATACCGGAACAACTGAGAAGCACCAGT
CGCAGTAGATTCTTTTCTAGAGTTGGATCACAAAGATCTTCACCTAATTATGGTTCTCAT
GTATCACGACAGCAGGAATACAGCTATCATGATATACAATCCTCTCAAAATACTTTGCAT
AGAGCAGAATTCTGGAAAGGTCCAGGTCACAAAAGTCTTGGCTTCAGTATCGTTGGAGGC
ACAGATTCTCCAAAAGGGCAAATGGGTATATTTGTTAAAACAGTCTTTCCAAACGGGCAA
GCAGCCGATAAGGGAACTATTTATGAAGGTGACGAAATCTTATCAGTTAACAACGTGGCA
ACTCGAGGATTAAGCCATGCTGGAGCAATATCATTGTTCAAAAAAGTTAAAGAAGGAAAA
TTAGAATTGACGCTTTCAAGAAGAAGAGCTCCTAGGTCAAGATCTGTAGAACCTCTCGGT
AACTTTCGCAACGATAGCAAAAGAGATTGA
Protein sequence:
MVMEDDANDMKKVFATWGRRMGRKLDLLKKNESKEMPEEPGTHESVSNDSSIVLTGQYKK
KQNWKMGRSTSDSSSLKRDSDTESIRSGSRDRSPSPFKSFFHRMGSTGMLNSSKTQSLNS
PNPPNSYSLSNGPALYRSCSTSHLSTYVKADDPSDDIDLQNTGAETKNSPTKQKNANLLT
EDNFVSSSTKAISCDNIPNKLEAPQNTGTCKKPNFPYAFLRSKLSVLPEENSLASHRSVS
VRQSFSERIDRKSPKFRKERLYLSNSRSEERYQSSDNISVHDESILINSGLRNCNDFARS
SIRSINETDVYQNKHVDDVLRRSSMISHKAPIDYDPMLIPRNRNSLPVYEYRSTIGSAHD
LKGDLASSNQSIHQEVLQAHRLSSYVSSNESGYDSDGRPTDEHSNHSPPGYGNNMGGISI
TMNGEHNLGNFSRQLSLNHKINVNKVQVPMRRSSTPCALFPIEKKSYYEYENENRDDNQY
QNNDSNLIIIDYNDGKPPPLPKKTVHKKTPYIYKTITLDERVQTRKIKLLQSQLVSVDHS
STPNLSDNSLNTSKELNNVQRIHETDILGRGPCTKRFRKIRLLKSRLDESLGVYLAQNRV
DFDKSGNNYEIRYIIVKLDFDGIAHRDGRLRIGDEIVNVNGKVLRGLSSLRDVQHIVNSC
STEATIEDSGLFQRYQVDLVMAHDEISPITLSRIINNKSSEPSSVHSSSSIPPDIIAQTH
KPSPPNQMVIETHFPSTDSTLNLRNSNNTSGYVNDMPEKNQKCEVGIQVNNNLLLSNQKS
DDEKLLERNYYTQSHSSLQNITNIEISMRSSPTPRHGTNSSYRPISFHSTRPQHLCGTTL
CNDNTTNDIKENSSHYIKNVHRTYQNRSYESIPEQLRSTSRSRFFSRVGSQRSSPNYGSH
VSRQQEYSYHDIQSSQNTLHRAEFWKGPGHKSLGFSIVGGTDSPKGQMGIFVKTVFPNGQ
AADKGTIYEGDEILSVNNVATRGLSHAGAISLFKKVKEGKLELTLSRRRAPRSRSVEPLG
NFRNDSKRD