| New model in OGS2.0 | DPOGS202371 |
|---|---|
| Genomic Position | scaffold12096:- 1437-5681 |
| See gene structure | |
| CDS Length | 1137 |
| Paired RNAseq reads | 421 |
| Single RNAseq reads | 1362 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013791 (6e-84) |
| Best Drosophila hit | Nup62 (1e-47) |
| Best Human hit | nuclear pore glycoprotein p62 (3e-42) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (5e-61) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (4e-58) |
| GeneOntology terms | GO:0005643 nuclear pore GO:0017056 structural constituent of nuclear pore GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR007758 Nucleoporin, Nsp1-like, C-terminal |
| Orthology group | MCL12333 |
Nucleotide sequence:
ATGTTTGGCCAATCACAGCCATCACAGACGCCAAGTTTCGGCCAATCCGGCCAGACCTCT
ACATCACAGACAACTCAAGCCATAAGCTTCAGTACAAGTCTTTCTACGGCACAAACCACT
AGTGCATCGGGACTATCGACTAGCGGGTTAGGAATATCGACCAGTGGTTTCGGGCTCACA
ACTAGTGGGACGGGAATCTCGACGAGCGGTTTGGGAATATCATCGAGTTTAGGAGTGTCG
ACTGCAACAGCGGGAATCACTACTAGCAGCTTGGGGATATCCACAAGCGCTCTGGGAACC
ACTACCACGAGTGGTATATCTCTCGCCGGTGGCTTATCATTCGCCAAGACAACAACAGCA
ACTTCAACGACCCCGTCCGGTATAACAGCGTTGGGTAAAACGGCTGCAAGTGTGATGCCT
CCTACTACAGTTGTTGTTGTTCTCATCGCCAGATCCCAAGCCCCTCCAGCGGCTATAACT
TCAATAAATTTCGCGGAACTCCAGGAAAATATCAATAAGTGGAGTTTGTCTTTGGAGGAA
CAGGAGAGAGTTTTCTACAGACAAGCGACTACACTCAACGCCTGGGACAGACTATCGGCG
AGTAACGGTGAAAAGATCTTAGAGCTGAACGAGGCTATAGAGACACTCAAGAACGAGCAA
CAGAGTTTGGAACACGAACTGGACTTTGTTCTAGCACAACAGAAGGAGCTAGAAGATATA
CTCACACCGTTAGAGAAGAATATAGTGGATGAAAGAGTTAGAGATCCGGAGAGAGAACAT
ATGTATTCATTAGCGGAGACTTTGGATACACAGTTACGGCAAATGTCTGAGGACTTGAAA
GAAGTCATCGAACATCTCAATGAGACCAATAGAAATCCAGACAATAATGATCCAATCGTC
CAGATAGGTCGGATCCTCAACGCTCACATGTCGTCCATGCAATGGATCGACAGCTCCATA
GCTCAGATAACGACCAAGCTGGACGGGCTCCGGGCGACACACGACGCGCTCAGGAAAGAC
AACCAGAGACTGAACTCTGCATACAACAAGAAAAGTATAGACAAAGCTGCATCTCTCGTG
TCTCCTCCACCCTACGTGACACTGGCAGAGTATACGTGCGGGTCTTCGCACGGATGA
Protein sequence:
MFGQSQPSQTPSFGQSGQTSTSQTTQAISFSTSLSTAQTTSASGLSTSGLGISTSGFGLT
TSGTGISTSGLGISSSLGVSTATAGITTSSLGISTSALGTTTTSGISLAGGLSFAKTTTA
TSTTPSGITALGKTAASVMPPTTVVVVLIARSQAPPAAITSINFAELQENINKWSLSLEE
QERVFYRQATTLNAWDRLSASNGEKILELNEAIETLKNEQQSLEHELDFVLAQQKELEDI
LTPLEKNIVDERVRDPEREHMYSLAETLDTQLRQMSEDLKEVIEHLNETNRNPDNNDPIV
QIGRILNAHMSSMQWIDSSIAQITTKLDGLRATHDALRKDNQRLNSAYNKKSIDKAASLV
SPPPYVTLAEYTCGSSHG